Difference between revisions of "TRYPTOPHAN-AMINOTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction RXN1G-368 == * direction: ** left-to-right * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [http://enzyme.expasy....")
(Created page with "Category:reaction == Reaction 1.3.3.12-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.3.3.12 ec-1.3.3.12] == Reaction formula == * 1 [...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN1G-368 ==
+
== Reaction 1.3.3.12-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
+
** [http://enzyme.expasy.org/EC/1.3.3.12 ec-1.3.3.12]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Stearoyl-ACPs]][c] '''=>''' 1 [[3-oxo-arachidoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
+
* 1 [[CPD-330]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[SJ10624]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ06617]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ15984]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ04443]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ15983]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ18059]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ00005]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWYG-321]], mycolate biosynthesis:
 
** '''26''' reactions found over '''182''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[previous_meneco]]; tool: [[curation]]; comment: reaction added with meneco (previous version)
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20617 20617]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00643 R00643]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
{{#set: ec-number=ec-1.3.3.12}}
{{#set: ec-number=ec-2.3.1.41}}
+
{{#set: nb gene associated=0}}
{{#set: nb gene associated=7}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction comment=reaction added with meneco (previous version)}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=previous_meneco}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 19:07, 14 January 2021

Reaction 1.3.3.12-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links