Difference between revisions of "TRYPTOPHAN-AMINOTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-14160 == * direction: ** left-to-right * common-name: ** glycerophosphorylethanolamine phosphodiesterase ** l-1-glycerophophorylethanolam...")
(Created page with "Category:reaction == Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** l-tryptophan:2-oxoglutarate aminotransferase * ec-number: **...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14160 ==
+
== Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** glycerophosphorylethanolamine phosphodiesterase
+
** l-tryptophan:2-oxoglutarate aminotransferase
−
** l-1-glycerophophorylethanolamine phosphodiesterase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4.46]
+
** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27]
−
** [http://enzyme.expasy.org/EC/3.1.4.2 ec-3.1.4.2]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-1-GLYCEROPHOSPHORYLETHANOL-AMINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ETHANOL-AMINE]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TRP]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[INDOLE_PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16458]]
+
* Gene: [[SJ04188]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00999]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7409]], phospholipid remodeling (phosphatidylethanolamine, yeast):
+
* [[PWY-581]], indole-3-acetate biosynthesis II:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5081]], L-tryptophan degradation VIII (to tryptophol):
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[TRPKYNCAT-PWY]], L-tryptophan degradation IV (via indole-3-lactate):
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[TRPIAACAT-PWY]], indole-3-acetate biosynthesis VI (bacteria):
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR104947
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29320 29320]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14096 14096]
−
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
−
{{#set: common-name=glycerophosphorylethanolamine phosphodiesterase|l-1-glycerophophorylethanolamine phosphodiesterase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00684 R00684]
−
{{#set: ec-number=ec-3.1.4.46|ec-3.1.4.2}}
+
{{#set: direction=reversible}}
−
{{#set: nb gene associated=2}}
+
{{#set: common-name=l-tryptophan:2-oxoglutarate aminotransferase}}
−
{{#set: nb pathway associated=1}}
+
{{#set: ec-number=ec-2.6.1.27}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN

  • direction:
    • reversible
  • common-name:
    • l-tryptophan:2-oxoglutarate aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-581, indole-3-acetate biosynthesis II:
    • 5 reactions found over 12 reactions in the full pathway
  • PWY-5081, L-tryptophan degradation VIII (to tryptophol):
    • 1 reactions found over 4 reactions in the full pathway
  • TRPKYNCAT-PWY, L-tryptophan degradation IV (via indole-3-lactate):
    • 1 reactions found over 2 reactions in the full pathway
  • TRPIAACAT-PWY, indole-3-acetate biosynthesis VI (bacteria):
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR104947
  • RHEA:
  • LIGAND-RXN:





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