Difference between revisions of "TRYPTOPHAN-AMINOTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction SULFATE-ADENYLYLTRANS-RXN == * direction: ** reversible * common-name: ** sulfate adenylyltransferase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** l-tryptophan:2-oxoglutarate aminotransferase * ec-number: **...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SULFATE-ADENYLYLTRANS-RXN ==
+
== Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** sulfate adenylyltransferase
+
** l-tryptophan:2-oxoglutarate aminotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4]
+
** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TRP]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[INDOLE_PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09890]]
+
* Gene: [[SJ04188]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04851]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[DISSULFRED-PWY]], dissimilatory sulfate reduction I (to hydrogen sufide)):
+
* [[PWY-581]], indole-3-acetate biosynthesis II:
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''12''' reactions in the full pathway
−
* [[P224-PWY]], dissimilatory sulfate reduction II (to thiosulfate):
+
* [[PWY-5081]], L-tryptophan degradation VIII (to tryptophol):
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6683]], assimilatory sulfate reduction III:
+
* [[TRPKYNCAT-PWY]], L-tryptophan degradation IV (via indole-3-lactate):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[SULFMETII-PWY]], assimilatory sulfate reduction II:
+
* [[TRPIAACAT-PWY]], indole-3-acetate biosynthesis VI (bacteria):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5340]], sulfate activation for sulfonation:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5278]], sulfite oxidation III:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR104947
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18136 18136]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14096 14096]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00684 R00684]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q12650 Q12650]
 
−
** [http://www.uniprot.org/uniprot/O33581 O33581]
 
−
** [http://www.uniprot.org/uniprot/O34764 O34764]
 
−
** [http://www.uniprot.org/uniprot/Q10600 Q10600]
 
−
** [http://www.uniprot.org/uniprot/O67174 O67174]
 
−
** [http://www.uniprot.org/uniprot/P21156 P21156]
 
−
** [http://www.uniprot.org/uniprot/O23324 O23324]
 
−
** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
 
−
** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
 
−
** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
 
−
** [http://www.uniprot.org/uniprot/P28604 P28604]
 
−
** [http://www.uniprot.org/uniprot/Q27128 Q27128]
 
−
** [http://www.uniprot.org/uniprot/P23845 P23845]
 
−
** [http://www.uniprot.org/uniprot/O43252 O43252]
 
−
** [http://www.uniprot.org/uniprot/Q43170 Q43170]
 
−
** [http://www.uniprot.org/uniprot/Q43183 Q43183]
 
−
** [http://www.uniprot.org/uniprot/Q43870 Q43870]
 
−
** [http://www.uniprot.org/uniprot/Q12555 Q12555]
 
−
** [http://www.uniprot.org/uniprot/P08536 P08536]
 
−
** [http://www.uniprot.org/uniprot/P74241 P74241]
 
−
** [http://www.uniprot.org/uniprot/O48888 O48888]
 
−
** [http://www.uniprot.org/uniprot/Q39595 Q39595]
 
−
** [http://www.uniprot.org/uniprot/Q96349 Q96349]
 
−
** [http://www.uniprot.org/uniprot/Q96541 Q96541]
 
−
** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
 
−
** [http://www.uniprot.org/uniprot/P13441 P13441]
 
−
** [http://www.uniprot.org/uniprot/P13442 P13442]
 
−
</div>
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=sulfate adenylyltransferase}}
+
{{#set: common-name=l-tryptophan:2-oxoglutarate aminotransferase}}
−
{{#set: ec-number=ec-2.7.7.4}}
+
{{#set: ec-number=ec-2.6.1.27}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN

  • direction:
    • reversible
  • common-name:
    • l-tryptophan:2-oxoglutarate aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-581, indole-3-acetate biosynthesis II:
    • 5 reactions found over 12 reactions in the full pathway
  • PWY-5081, L-tryptophan degradation VIII (to tryptophol):
    • 1 reactions found over 4 reactions in the full pathway
  • TRPKYNCAT-PWY, L-tryptophan degradation IV (via indole-3-lactate):
    • 1 reactions found over 2 reactions in the full pathway
  • TRPIAACAT-PWY, indole-3-acetate biosynthesis VI (bacteria):
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR104947
  • RHEA:
  • LIGAND-RXN:





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