Difference between revisions of "TRYPTOPHAN-AMINOTRANSFERASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-14160 == * direction: ** left-to-right * common-name: ** glycerophosphorylethanolamine phosphodiesterase ** l-1-glycerophophorylethanolam...")
(Created page with "Category:reaction == Reaction SULFATE-ADENYLYLTRANS-RXN == * direction: ** reversible * common-name: ** sulfate adenylyltransferase * ec-number: ** [http://enzyme.expasy.o...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14160 ==
+
== Reaction SULFATE-ADENYLYLTRANS-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** glycerophosphorylethanolamine phosphodiesterase
+
** sulfate adenylyltransferase
−
** l-1-glycerophophorylethanolamine phosphodiesterase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4.46]
+
** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4]
−
** [http://enzyme.expasy.org/EC/3.1.4.2 ec-3.1.4.2]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-1-GLYCEROPHOSPHORYLETHANOL-AMINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ETHANOL-AMINE]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16458]]
+
* Gene: [[SJ09890]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ00999]]
+
* Gene: [[SJ04851]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7409]], phospholipid remodeling (phosphatidylethanolamine, yeast):
+
* [[DISSULFRED-PWY]], dissimilatory sulfate reduction I (to hydrogen sufide)):
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[P224-PWY]], dissimilatory sulfate reduction II (to thiosulfate):
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6683]], assimilatory sulfate reduction III:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[SULFMETII-PWY]], assimilatory sulfate reduction II:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5340]], sulfate activation for sulfonation:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5278]], sulfite oxidation III:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29320 29320]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18136 18136]
−
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
−
{{#set: common-name=glycerophosphorylethanolamine phosphodiesterase|l-1-glycerophophorylethanolamine phosphodiesterase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
−
{{#set: ec-number=ec-3.1.4.46|ec-3.1.4.2}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q12650 Q12650]
 +
** [http://www.uniprot.org/uniprot/O33581 O33581]
 +
** [http://www.uniprot.org/uniprot/O34764 O34764]
 +
** [http://www.uniprot.org/uniprot/Q10600 Q10600]
 +
** [http://www.uniprot.org/uniprot/O67174 O67174]
 +
** [http://www.uniprot.org/uniprot/P21156 P21156]
 +
** [http://www.uniprot.org/uniprot/O23324 O23324]
 +
** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
 +
** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
 +
** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
 +
** [http://www.uniprot.org/uniprot/P28604 P28604]
 +
** [http://www.uniprot.org/uniprot/Q27128 Q27128]
 +
** [http://www.uniprot.org/uniprot/P23845 P23845]
 +
** [http://www.uniprot.org/uniprot/O43252 O43252]
 +
** [http://www.uniprot.org/uniprot/Q43170 Q43170]
 +
** [http://www.uniprot.org/uniprot/Q43183 Q43183]
 +
** [http://www.uniprot.org/uniprot/Q43870 Q43870]
 +
** [http://www.uniprot.org/uniprot/Q12555 Q12555]
 +
** [http://www.uniprot.org/uniprot/P08536 P08536]
 +
** [http://www.uniprot.org/uniprot/P74241 P74241]
 +
** [http://www.uniprot.org/uniprot/O48888 O48888]
 +
** [http://www.uniprot.org/uniprot/Q39595 Q39595]
 +
** [http://www.uniprot.org/uniprot/Q96349 Q96349]
 +
** [http://www.uniprot.org/uniprot/Q96541 Q96541]
 +
** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
 +
** [http://www.uniprot.org/uniprot/P13441 P13441]
 +
** [http://www.uniprot.org/uniprot/P13442 P13442]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=sulfate adenylyltransferase}}
 +
{{#set: ec-number=ec-2.7.7.4}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=6}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:08, 5 January 2021

Reaction SULFATE-ADENYLYLTRANS-RXN

  • direction:
    • reversible
  • common-name:
    • sulfate adenylyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • DISSULFRED-PWY, dissimilatory sulfate reduction I (to hydrogen sufide)):
    • 2 reactions found over 4 reactions in the full pathway
  • P224-PWY, dissimilatory sulfate reduction II (to thiosulfate):
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6683, assimilatory sulfate reduction III:
    • 3 reactions found over 3 reactions in the full pathway
  • SULFMETII-PWY, assimilatory sulfate reduction II:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5340, sulfate activation for sulfonation:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5278, sulfite oxidation III:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=TRYPTOPHAN-AMINOTRANSFERASE-RXN&oldid=65019"