Difference between revisions of "XMPXAN-RXN"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-27...") |
(Created page with "Category:reaction == Reaction XMPXAN-RXN == * direction: ** left-to-right * common-name: ** xmp phosphohydrolase ** 5'-nucleotidase * ec-number: ** [http://enzyme.expasy.o...") |
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| − | [[Category: | + | [[Category:reaction]] |
| − | == | + | == Reaction XMPXAN-RXN == |
| − | * | + | * direction: |
| − | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
| − | ** | + | ** xmp phosphohydrolase |
| − | == Reaction(s) | + | ** 5'-nucleotidase |
| − | * [[ | + | * ec-number: |
| − | * [[ | + | ** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5] |
| − | * [[ | + | == Reaction formula == |
| − | * [[ | + | * 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[XANTHOSINE]][c] |
| − | * [[ | + | == Gene(s) associated with this reaction == |
| − | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| − | * [[ | + | * Gene: [[SJ16098]] |
| − | == | + | ** Category: [[annotation]] |
| − | * [http:// | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * [http:// | + | ** Category: [[orthology]] |
| − | {{#set: | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | {{#set: | + | * Gene: [[SJ18895]] |
| − | {{#set: nb | + | ** Category: [[annotation]] |
| − | {{#set: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | {{#set: | + | * Gene: [[SJ15366]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ18402]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ09030]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| + | </div> | ||
| + | == Pathway(s) == | ||
| + | * [[PWY-5695]], inosine 5'-phosphate degradation: | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6596]], adenosine nucleotides degradation I: | ||
| + | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == External links == | ||
| + | * METANETX-RXN : MNXR102029 | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28531 28531] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R02719 R02719] | ||
| + | {{#set: direction=left-to-right}} | ||
| + | {{#set: common-name=xmp phosphohydrolase|5'-nucleotidase}} | ||
| + | {{#set: ec-number=ec-3.1.3.5}} | ||
| + | {{#set: nb gene associated=5}} | ||
| + | {{#set: nb pathway associated=2}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
| + | {{#set: reconstruction comment=n.a}} | ||
| + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} | ||
Latest revision as of 11:23, 18 March 2021
Contents
Reaction XMPXAN-RXN
- direction:
- left-to-right
- common-name:
- xmp phosphohydrolase
- 5'-nucleotidase
- ec-number:
Reaction formula
- 1 WATER[c] + 1 XANTHOSINE-5-PHOSPHATE[c] => 1 Pi[c] + 1 XANTHOSINE[c]
Gene(s) associated with this reaction
- Gene: SJ16098
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ18895
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ15366
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ18402
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ09030
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5695, inosine 5'-phosphate degradation:
- 4 reactions found over 4 reactions in the full pathway
- PWY-6596, adenosine nucleotides degradation I:
- 7 reactions found over 8 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
