Difference between revisions of "RXN-15830"
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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14179 RXN-14179] == * common name: ** scopolin β-glucosidase * ec number: ** [http://enzym...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15830 RXN-15830] == * common name: ** cytochrome-c oxidase * ec number: ** [http://enzyme.expas...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15830 RXN-15830] == |
* common name: | * common name: | ||
| − | ** | + | ** cytochrome-c oxidase |
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/3 | + | ** [http://enzyme.expasy.org/EC/1.9.3.1 EC-1.9.3.1] |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| Line 11: | Line 11: | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 4 [[Cytochromes-C-Reduced]][e] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 8 [[PROTON]][c] '''=>''' 4 [[PROTON]][e] '''+''' 4 [[Cytochromes-C-Oxidized]][e] '''+''' 2 [[WATER]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 4 a reduced c-type cytochrome[e] '''+''' 1 oxygen[c] '''+''' 8 H+[c] '''=>''' 4 H+[e] '''+''' 4 an oxidized c-type cytochrome[e] '''+''' 2 H2O[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[DN21590_c0_g1_i1]] |
| + | ** Source: [[annotation-transcriptome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[DN16671_c0_g1_i1]] | ||
| + | ** Source: [[annotation-transcriptome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[DN11833_c0_g1_i1]] | ||
| + | ** Source: [[annotation-transcriptome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[DN12802_c0_g1_i1]] | ||
** Source: [[annotation-transcriptome]] | ** Source: [[annotation-transcriptome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-6692]], Fe(II) oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6692 PWY-6692] | ||
| + | ** '''3''' reactions found over '''NA''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 26: | Line 37: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | {{#set: common name=cytochrome-c oxidase}} |
| − | {{#set: ec number=EC-3 | + | {{#set: ec number=EC-1.9.3.1}} |
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=DN21590_c0_g1_i1|DN16671_c0_g1_i1|DN11833_c0_g1_i1|DN12802_c0_g1_i1}} |
| − | {{#set: in pathway=}} | + | {{#set: in pathway=PWY-6692}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-transcriptome}} | {{#set: reconstruction source=annotation-transcriptome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 14:20, 15 January 2021
Contents
Reaction RXN-15830
- common name:
- cytochrome-c oxidase
- ec number:
- direction:
- LEFT-TO-RIGHT
- Synonym(s):
Reaction Formula
- With identifiers:
- 4 Cytochromes-C-Reduced[e] + 1 OXYGEN-MOLECULE[c] + 8 PROTON[c] => 4 PROTON[e] + 4 Cytochromes-C-Oxidized[e] + 2 WATER[c]
- With common name(s):
- 4 a reduced c-type cytochrome[e] + 1 oxygen[c] + 8 H+[c] => 4 H+[e] + 4 an oxidized c-type cytochrome[e] + 2 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: DN21590_c0_g1_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN16671_c0_g1_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN11833_c0_g1_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN12802_c0_g1_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-transcriptome
- Tool: pathwaytools
- Source: annotation-transcriptome
