Difference between revisions of "RXN-12570"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5181 RXN0-5181] == * common name: ** α-amylase * ec number: ** [http://enzyme.expasy.org...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12570 RXN-12570] == * common name: ** 3-hydroxyhexanoyl-CoA dehydrogenase * ec number: ** [http...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5181 RXN0-5181] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12570 RXN-12570] ==
 
* common name:
 
* common name:
−
** α-amylase
+
** 3-hydroxyhexanoyl-CoA dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.1 EC-3.2.1.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[1-4-alpha-D-Glucan]][c] '''+''' n [[WATER]][c] '''=>''' 1 [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[MALTOHEXAOSE]][c]
+
** 1 [[K-HEXANOYL-COA]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[OH-HEXANOYL-COA]][c] '''+''' 1 [[NAD]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 1,4-α-D-glucan[c] '''+''' n H2O[c] '''=>''' 1 a 1,4-α-D-glucan[c] '''+''' 1 maltohexaose[c]
+
** 1 3-oxohexanoyl-CoA[c] '''+''' 1 NADH[c] '''+''' 1 H+[c] '''=>''' 1 (S)-3-hydroxyhexanoyl-CoA[c] '''+''' 1 NAD+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN20268_c0_g1_i4]]
+
* Gene: [[DN5555_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN20268_c0_g1_i3]]
+
* Gene: [[DN14559_c0_g1_i3]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN15559_c0_g1_i1]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
 +
** '''4''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=α-amylase}}
+
* RHEA:
−
{{#set: ec number=EC-3.2.1.1}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31144 31144]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04748 R04748]
 +
{{#set: common name=3-hydroxyhexanoyl-CoA dehydrogenase}}
 +
{{#set: ec number=EC-1.1.1.35}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN20268_c0_g1_i4|DN20268_c0_g1_i3|DN15559_c0_g1_i1}}
+
{{#set: gene associated=DN5555_c0_g1_i1|DN14559_c0_g1_i3}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-6863}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:20, 15 January 2021

Reaction RXN-12570

  • common name:
    • 3-hydroxyhexanoyl-CoA dehydrogenase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxohexanoyl-CoA[c] + 1 NADH[c] + 1 H+[c] => 1 (S)-3-hydroxyhexanoyl-CoA[c] + 1 NAD+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6863, pyruvate fermentation to hexanol (engineered): PWY-6863
    • 4 reactions found over NA reactions in the full pathway

Reconstruction information

External links





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