Difference between revisions of "RXN-10059"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN] == * common name...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10059 RXN-10059] == * common name: ** 3-oxo-cerotoyl-[acp] synthase * ec number: ** [http://enz...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10059 RXN-10059] ==
 
* common name:
 
* common name:
−
** ornithine aminotransferase
+
** 3-oxo-cerotoyl-[acp] synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.13 EC-2.6.1.13]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-ORNITHINE]][c] '''+''' 1 [[2-Oxo-carboxylates]][c] '''<=>''' 1 [[Amino-Acids-20]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
+
** 1 [[Lignoceroyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-cerotoyl-ACPs]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-ornithine[c] '''+''' 1 a 2-oxo carboxylate[c] '''<=>''' 1 a proteinogenic amino acid[c] '''+''' 1 L-glutamate-5-semialdehyde[c]
+
** 1 a lignoceroyl-[acp][c] '''+''' 1 malonyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 a 3-oxo-cerotoyl-[acp][c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN20824_c0_g1_i2]]
+
* Gene: [[DN18128_c0_g1_i1]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN20824_c0_g1_i1]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN20824_c0_g2_i2]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN20561_c0_g1_i2]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
 +
** '''17''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY-6113]], superpathway of mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6113 PWY-6113]
 +
** '''7''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=3-oxo-cerotoyl-[acp] synthase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13880 13880]
+
{{#set: ec number=EC-2.3.1.41}}
−
* LIGAND-RXN:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01343 R01343]
+
{{#set: gene associated=DN18128_c0_g1_i1}}
−
* UNIPROT:
+
{{#set: in pathway=PWYG-321|PWY-6113}}
−
** [http://www.uniprot.org/uniprot/P31893 P31893]
 
−
** [http://www.uniprot.org/uniprot/P38021 P38021]
 
−
** [http://www.uniprot.org/uniprot/Q9P7L5 Q9P7L5]
 
−
** [http://www.uniprot.org/uniprot/P07991 P07991]
 
−
** [http://www.uniprot.org/uniprot/P04181 P04181]
 
−
** [http://www.uniprot.org/uniprot/P29758 P29758]
 
−
** [http://www.uniprot.org/uniprot/P04182 P04182]
 
−
{{#set: common name=ornithine aminotransferase}}
 
−
{{#set: ec number=EC-2.6.1.13}}
 
−
{{#set: direction=REVERSIBLE}}
 
−
{{#set: gene associated=DN20824_c0_g1_i2|DN20824_c0_g1_i1|DN20824_c0_g2_i2|DN20561_c0_g1_i2}}
 
−
{{#set: in pathway=}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:21, 15 January 2021

Reaction RXN-10059

  • common name:
    • 3-oxo-cerotoyl-[acp] synthase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 17 reactions found over NA reactions in the full pathway
  • PWY-6113, superpathway of mycolate biosynthesis: PWY-6113
    • 7 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Property "Common name" (as page type) with input value "3-oxo-cerotoyl-[acp] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-10059&oldid=8295"