Difference between revisions of "DIHYDROXYISOVALDEHYDRAT-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9536 RXN-9536] == * common name: ** 3-oxo-meristoyl-[acyl-carrier protein] reductase ** (R)-3-h...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYISOVALDEHYDRAT-RXN DIHYDROXYISOVALDEHYDRAT-RXN] == * common name: ** 2,3-dihydroxy-isovale...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9536 RXN-9536] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYISOVALDEHYDRAT-RXN DIHYDROXYISOVALDEHYDRAT-RXN] ==
 
* common name:
 
* common name:
−
** 3-oxo-meristoyl-[acyl-carrier protein] reductase
+
** 2,3-dihydroxy-isovalerate dehydratase
−
** (R)-3-hydroxymyristoyl-[acp] reductase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
−
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
Line 14: Line 11:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-oxo-myristoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[R-3-hydroxymyristoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[CPD-13357]][c] '''=>''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 3-oxo-myristoyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a (3R)-3-hydroxymyristoyl-[acp][c] '''+''' 1 NADP+[c]
+
** 1 (2R)-2,3-dihydroxy-3-methylbutanoate[c] '''=>''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN18128_c0_g1_i1]]
+
* Gene: [[DN372_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN6632_c0_g1_i1]]
+
* Gene: [[DN29940_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN25390_c0_g1_i1]]
+
* Gene: [[DN19316_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN20375_c0_g1_i2]]
+
* Gene: [[DN4956_c0_g2_i1]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN20375_c0_g1_i4]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN20375_c0_g1_i1]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN13183_c0_g1_i1]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN11444_c0_g1_i1]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
* [[VALSYN-PWY]], L-valine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
−
** '''27''' reactions found over '''NA''' reactions in the full pathway
+
** '''4''' reactions found over '''NA''' reactions in the full pathway
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111]
−
** '''27''' reactions found over '''NA''' reactions in the full pathway
+
** '''3''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 54: Line 39:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=3-oxo-meristoyl-[acyl-carrier protein] reductase}}
+
* RHEA:
−
{{#set: common name=(R)-3-hydroxymyristoyl-[acp] reductase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24810 24810]
−
{{#set: ec number=EC-2.3.1.86}}
+
* LIGAND-RXN:
−
{{#set: ec number=EC-2.3.1.85}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04441 R04441]
−
{{#set: ec number=EC-1.1.1.100}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P55186 P55186]
 +
** [http://www.uniprot.org/uniprot/Q9JUE0 Q9JUE0]
 +
** [http://www.uniprot.org/uniprot/P05791 P05791]
 +
** [http://www.uniprot.org/uniprot/Q9UZ03 Q9UZ03]
 +
** [http://www.uniprot.org/uniprot/P44851 P44851]
 +
** [http://www.uniprot.org/uniprot/Q02139 Q02139]
 +
** [http://www.uniprot.org/uniprot/Q9PJ98 Q9PJ98]
 +
** [http://www.uniprot.org/uniprot/P39522 P39522]
 +
{{#set: common name=2,3-dihydroxy-isovalerate dehydratase}}
 +
{{#set: ec number=EC-4.2.1.9}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN18128_c0_g1_i1|DN6632_c0_g1_i1|DN25390_c0_g1_i1|DN20375_c0_g1_i2|DN20375_c0_g1_i4|DN20375_c0_g1_i1|DN13183_c0_g1_i1|DN11444_c0_g1_i1}}
+
{{#set: gene associated=DN372_c0_g1_i1|DN29940_c0_g1_i1|DN19316_c0_g1_i1|DN4956_c0_g2_i1}}
−
{{#set: in pathway=PWY-5971|PWY-5994}}
+
{{#set: in pathway=VALSYN-PWY|PWY-7111}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction DIHYDROXYISOVALDEHYDRAT-RXN

  • common name:
    • 2,3-dihydroxy-isovalerate dehydratase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2R)-2,3-dihydroxy-3-methylbutanoate[c] => 1 3-methyl-2-oxobutanoate[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALSYN-PWY, L-valine biosynthesis: VALSYN-PWY
    • 4 reactions found over NA reactions in the full pathway
  • PWY-7111, pyruvate fermentation to isobutanol (engineered): PWY-7111
    • 3 reactions found over NA reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=DIHYDROXYISOVALDEHYDRAT-RXN&oldid=8827"