Difference between revisions of "4.1.3.17-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12669 RXN-12669] == * common name: ** acyl-CoA oxidase * ec number: ** [http://enzyme.expasy.or...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.3.17-RXN 4.1.3.17-RXN] == * common name: ** 4-hydroxy-4-methyl-2-oxoglutarate aldolase * ec num...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12669 RXN-12669] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.3.17-RXN 4.1.3.17-RXN] ==
 
* common name:
 
* common name:
−
** acyl-CoA oxidase
+
** 4-hydroxy-4-methyl-2-oxoglutarate aldolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
+
** [http://enzyme.expasy.org/EC/4.1.3.17 EC-4.1.3.17]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
Line 11: Line 11:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-196]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD0-2108]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
** 2 [[PYRUVATE]][c] '''=>''' 1 [[CPD-187]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 octanoyl-CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 (2E)-oct-2-enoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
+
** 2 pyruvate[c] '''=>''' 1 4-hydroxy-4-methyl-2-oxoglutarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN13602_c0_g1_i2]]
+
* Gene: [[DN18974_c0_g1_i1]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN17066_c0_g1_i1]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN19232_c0_g1_i2]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
+
* [[PWY-7701]], 4-hydroxy-4-methyl-L-glutamate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7701 PWY-7701]
 
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
Line 34: Line 28:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=acyl-CoA oxidase}}
+
* RHEA:
−
{{#set: ec number=EC-1.3.3.6}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22751 22751]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00008 R00008]
 +
{{#set: common name=4-hydroxy-4-methyl-2-oxoglutarate aldolase}}
 +
{{#set: ec number=EC-4.1.3.17}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN13602_c0_g1_i2|DN17066_c0_g1_i1|DN19232_c0_g1_i2}}
+
{{#set: gene associated=DN18974_c0_g1_i1}}
−
{{#set: in pathway=PWY-6920}}
+
{{#set: in pathway=PWY-7701}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction 4.1.3.17-RXN

  • common name:
    • 4-hydroxy-4-methyl-2-oxoglutarate aldolase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 pyruvate[c] => 1 4-hydroxy-4-methyl-2-oxoglutarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7701, 4-hydroxy-4-methyl-L-glutamate biosynthesis: PWY-7701
    • 1 reactions found over NA reactions in the full pathway

Reconstruction information

External links





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