Difference between revisions of "RXN-5284"
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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NUCLEOTIDASE-RXN NUCLEOTIDASE-RXN] == * ec number: ** [http://enzyme.expasy.org/EC/3.1.3.31 EC-3.1....") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5284 RXN-5284] == * common name: ** 131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester deh...") |
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Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5284 RXN-5284] == |
− | * | + | * common name: |
− | ** | + | ** 131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester dehydrogenase |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
Line 9: | Line 9: | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[131-OXO-MAGNESIUM-PROTOPORPHYRIN-IX-13-M]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[DIVINYL-PROTOCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c] '''+''' 2 [[WATER]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester[c] '''+''' 1 oxygen[c] '''+''' 1 NADPH[c] '''=>''' 1 3,8-divinyl protochlorophyllide a[c] '''+''' 1 NADP+[c] '''+''' 2 H2O[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * Gene: [[ | + | * Gene: [[DN18320_c0_g1_i3]] |
** Source: [[annotation-transcriptome]] | ** Source: [[annotation-transcriptome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | * Gene: [[ | + | * Gene: [[DN18320_c0_g1_i2]] |
− | |||
− | |||
− | |||
** Source: [[annotation-transcriptome]] | ** Source: [[annotation-transcriptome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
+ | * [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN] | ||
+ | ** '''9''' reactions found over '''NA''' reactions in the full pathway | ||
+ | * [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] | ||
+ | ** '''8''' reactions found over '''NA''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
Line 31: | Line 32: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16754 16754] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R06267 R06267] |
− | {{#set: | + | {{#set: common name=131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester dehydrogenase}} |
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: gene associated= | + | {{#set: gene associated=DN18320_c0_g1_i3|DN18320_c0_g1_i2}} |
− | {{#set: in pathway=}} | + | {{#set: in pathway=CHLOROPHYLL-SYN|PWY-7159}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-transcriptome}} | {{#set: reconstruction source=annotation-transcriptome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} |
Latest revision as of 14:22, 15 January 2021
Contents
Reaction RXN-5284
- common name:
- 131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester dehydrogenase
- direction:
- LEFT-TO-RIGHT
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 131-OXO-MAGNESIUM-PROTOPORPHYRIN-IX-13-M[c] + 1 OXYGEN-MOLECULE[c] + 1 NADPH[c] => 1 DIVINYL-PROTOCHLOROPHYLLIDE-A[c] + 1 NADP[c] + 2 WATER[c]
- With common name(s):
- 1 131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester[c] + 1 oxygen[c] + 1 NADPH[c] => 1 3,8-divinyl protochlorophyllide a[c] + 1 NADP+[c] + 2 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: DN18320_c0_g1_i3
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN18320_c0_g1_i2
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
Pathways
- CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
- 9 reactions found over NA reactions in the full pathway
- PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
- 8 reactions found over NA reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-transcriptome
- Tool: pathwaytools
- Source: annotation-transcriptome
External links