Difference between revisions of "RXN-14799"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] == * common name: ** XMP phosphohydrolase * ec number: ** [http://enzyme.exp...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] == * common name: ** 3-ketoacyl-CoA thiolase * ec number: ** [http://enzyme.ex...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] ==
 
* common name:
 
* common name:
−
** XMP phosphohydrolase
+
** 3-ketoacyl-CoA thiolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[XANTHOSINE]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[CPD-15687]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-15688]][c] '''+''' 1 [[ACETYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 XMP[c] '''+''' 1 H2O[c] '''=>''' 1 xanthosine[c] '''+''' 1 phosphate[c]
+
** 1 5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 (3Z,5E)-dodeca-3,5-dienoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN11312_c0_g1_i1]]
+
* Gene: [[DN11478_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN16240_c0_g1_i1]]
+
* Gene: [[DN11886_c0_g1_i2]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN31244_c0_g1_i1]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
+
* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340]
−
** '''7''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-5695]], inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
 
 
** '''3''' reactions found over '''NA''' reactions in the full pathway
 
** '''3''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
Line 36: Line 31:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=3-ketoacyl-CoA thiolase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28531 28531]
+
{{#set: ec number=EC-2.3.1.16}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02719 R02719]
 
−
{{#set: common name=XMP phosphohydrolase}}
 
−
{{#set: ec number=EC-3.1.3.5}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN11312_c0_g1_i1|DN16240_c0_g1_i1|DN31244_c0_g1_i1}}
+
{{#set: gene associated=DN11478_c0_g1_i2|DN11886_c0_g1_i2}}
−
{{#set: in pathway=PWY-6596|PWY-5695}}
+
{{#set: in pathway=PWY-7340}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction RXN-14799

  • common name:
    • 3-ketoacyl-CoA thiolase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA[c] + 1 coenzyme A[c] => 1 (3Z,5E)-dodeca-3,5-dienoyl-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7340, 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): PWY-7340
    • 3 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-14799&oldid=8904"