Difference between revisions of "O-SUCCHOMOSERLYASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-C-PALMITOYLTRANSFERASE-RXN SERINE-C-PALMITOYLTRANSFERASE-RXN] == * common name: ** serine pa...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] == * common name: ** O-succinylhomoserine(thiol)-lya...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-C-PALMITOYLTRANSFERASE-RXN SERINE-C-PALMITOYLTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] ==
 
* common name:
 
* common name:
−
** serine palmitoyltransferase
+
** O-succinylhomoserine(thiol)-lyase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.50 EC-2.3.1.50]
+
** [http://enzyme.expasy.org/EC/2.5.1.48 EC-2.5.1.48]
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[SER]][c] '''+''' 1 [[PALMITYL-COA]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[CO-A]][c]
+
** 1 [[CYS]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''<=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 L-serine[c] '''+''' 1 palmitoyl-CoA[c] '''=>''' 1 CO2[c] '''+''' 1 3-dehydrosphinganine[c] '''+''' 1 coenzyme A[c]
+
** 1 L-cysteine[c] '''+''' 1 O-succinyl-L-homoserine[c] '''<=>''' 1 L-cystathionine[c] '''+''' 1 succinate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN111_c0_g1_i1]]
+
* Gene: [[DN15452_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN15452_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY]
+
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
+
** '''2''' reactions found over '''NA''' reactions in the full pathway
−
* [[PWY3DJ-12]], ceramide de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12]
+
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
+
** '''4''' reactions found over '''NA''' reactions in the full pathway
−
* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
+
* [[PWY-801]], homocysteine and cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
+
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14762 14762]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01281 R01281]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P25045 P25045]
+
** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2]
−
** [http://www.uniprot.org/uniprot/O15270 O15270]
+
** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6]
−
** [http://www.uniprot.org/uniprot/P48241 P48241]
+
** [http://www.uniprot.org/uniprot/P38675 P38675]
−
** [http://www.uniprot.org/uniprot/Q09925 Q09925]
+
** [http://www.uniprot.org/uniprot/P24601 P24601]
−
** [http://www.uniprot.org/uniprot/P40970 P40970]
+
** [http://www.uniprot.org/uniprot/P00935 P00935]
−
** [http://www.uniprot.org/uniprot/Q9XVI6 Q9XVI6]
+
** [http://www.uniprot.org/uniprot/O04981 O04981]
−
** [http://www.uniprot.org/uniprot/Q20375 Q20375]
+
** [http://www.uniprot.org/uniprot/O04982 O04982]
−
** [http://www.uniprot.org/uniprot/Q9M304 Q9M304]
+
** [http://www.uniprot.org/uniprot/O81334 O81334]
−
{{#set: common name=serine palmitoyltransferase}}
+
** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9]
−
{{#set: ec number=EC-2.3.1.50}}
+
{{#set: common name=O-succinylhomoserine(thiol)-lyase}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: ec number=EC-2.5.1.48}}
−
{{#set: gene associated=DN111_c0_g1_i1}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: in pathway=SPHINGOLIPID-SYN-PWY|PWY3DJ-12|PWY-5129}}
+
{{#set: gene associated=DN15452_c0_g1_i2|DN15452_c0_g1_i1}}
 +
{{#set: in pathway=PWY-I9|HOMOSER-METSYN-PWY|PWY-801}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction O-SUCCHOMOSERLYASE-RXN

  • common name:
    • O-succinylhomoserine(thiol)-lyase
  • ec number:
  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-I9, L-cysteine biosynthesis VI (from L-methionine): PWY-I9
    • 2 reactions found over NA reactions in the full pathway
  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I: HOMOSER-METSYN-PWY
    • 4 reactions found over NA reactions in the full pathway
  • PWY-801, homocysteine and cysteine interconversion: PWY-801
    • 2 reactions found over NA reactions in the full pathway

Reconstruction information

External links





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