Difference between revisions of "THREONINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16626 RXN-16626] == * common name: ** (9Z)-3-oxo-octadec-9-enoyl-[acp] reductase * ec number: *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] == * common name: ** threonine—tRNA li...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16626 RXN-16626] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] ==
 
* common name:
 
* common name:
−
** (9Z)-3-oxo-octadec-9-enoyl-[acp] reductase
+
** threonine—tRNA ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/6.1.1.3 EC-6.1.1.3]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
Line 11: Line 11:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[9Z-3-oxo-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3R-9Z-3-hydroxy-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[THR-tRNAs]][c] '''+''' 1 [[THR]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Charged-THR-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (9Z)-3-oxo-octadec-9-enoyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a (3R,9Z)-3-hydroxy-octadec-9-enoyl-[acp][c] '''+''' 1 NADP+[c]
+
** 1 a tRNAThr[c] '''+''' 1 L-threonine[c] '''+''' 1 ATP[c] '''=>''' 1 an L-threonyl-[tRNAThr][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN20375_c0_g1_i2]]
+
* Gene: [[DN19143_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN20375_c0_g1_i4]]
+
* Gene: [[DN19143_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN20375_c0_g1_i1]]
+
* Gene: [[DN9109_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN19143_c0_g1_i4]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN28005_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN31319_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''10''' reactions found over '''NA''' reactions in the full pathway
+
** '''20''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 34: Line 43:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=(9Z)-3-oxo-octadec-9-enoyl-[acp] reductase}}
+
* RHEA:
−
{{#set: ec number=EC-1.1.1.100}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24625 24625]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03663 R03663]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O83809 O83809]
 +
** [http://www.uniprot.org/uniprot/Q9JVA3 Q9JVA3]
 +
** [http://www.uniprot.org/uniprot/P56071 P56071]
 +
** [http://www.uniprot.org/uniprot/O58430 O58430]
 +
** [http://www.uniprot.org/uniprot/P47615 P47615]
 +
** [http://www.uniprot.org/uniprot/O05947 O05947]
 +
** [http://www.uniprot.org/uniprot/Q9PIS3 Q9PIS3]
 +
** [http://www.uniprot.org/uniprot/O67583 O67583]
 +
** [http://www.uniprot.org/uniprot/O27504 O27504]
 +
** [http://www.uniprot.org/uniprot/O51662 O51662]
 +
** [http://www.uniprot.org/uniprot/Q9ZMV3 Q9ZMV3]
 +
** [http://www.uniprot.org/uniprot/Q9Z7A0 Q9Z7A0]
 +
** [http://www.uniprot.org/uniprot/Q9WZJ9 Q9WZJ9]
 +
** [http://www.uniprot.org/uniprot/Q9CED2 Q9CED2]
 +
** [http://www.uniprot.org/uniprot/P43014 P43014]
 +
** [http://www.uniprot.org/uniprot/P46244 P46244]
 +
** [http://www.uniprot.org/uniprot/P75225 P75225]
 +
** [http://www.uniprot.org/uniprot/Q48989 Q48989]
 +
** [http://www.uniprot.org/uniprot/P0A8M3 P0A8M3]
 +
** [http://www.uniprot.org/uniprot/O04630 O04630]
 +
** [http://www.uniprot.org/uniprot/P18255 P18255]
 +
** [http://www.uniprot.org/uniprot/P18256 P18256]
 +
** [http://www.uniprot.org/uniprot/P04801 P04801]
 +
** [http://www.uniprot.org/uniprot/P07236 P07236]
 +
** [http://www.uniprot.org/uniprot/P26639 P26639]
 +
{{#set: common name=threonine—tRNA ligase}}
 +
{{#set: ec number=EC-6.1.1.3}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN20375_c0_g1_i2|DN20375_c0_g1_i4|DN20375_c0_g1_i1}}
+
{{#set: gene associated=DN19143_c0_g1_i1|DN19143_c0_g1_i2|DN9109_c0_g1_i1|DN19143_c0_g1_i4|DN28005_c0_g1_i1|DN31319_c0_g1_i1}}
−
{{#set: in pathway=PWY-7664}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction THREONINE--TRNA-LIGASE-RXN

  • common name:
    • threonine—tRNA ligase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNAThr[c] + 1 L-threonine[c] + 1 ATP[c] => 1 an L-threonyl-[tRNAThr][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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