Difference between revisions of "RXN-12625"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPAMIDOTRANS-RXN PRPPAMIDOTRANS-RXN] == * common name: ** amidophosphoribosyltransferase * ec num...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12625 RXN-12625] == * common name: ** N,N'-diacetylchitobiose β-N-acetylglucosaminidase **...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPAMIDOTRANS-RXN PRPPAMIDOTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12625 RXN-12625] ==
 
* common name:
 
* common name:
−
** amidophosphoribosyltransferase
+
** N,N'-diacetylchitobiose β-N-acetylglucosaminidase
 +
** N-acetyl-β-glucosaminidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.2.14 EC-2.4.2.14]
+
** [http://enzyme.expasy.org/EC/3.2.1.52 EC-3.2.1.52]
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[5-P-BETA-D-RIBOSYL-AMINE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[PRPP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[CHITOBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[N-acetyl-D-glucosamine]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 5-phospho-&beta;-D-ribosylamine[c] '''+''' 1 diphosphate[c] '''+''' 1 L-glutamate[c] '''<=>''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c] '''+''' 1 L-glutamine[c] '''+''' 1 H2O[c]
+
** 1 N,N'-diacetylchitobiose[c] '''+''' 1 H2O[c] '''=>''' 2 N-acetyl-D-glucosamine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN22620_c0_g1_i4]]
+
* Gene: [[DN6856_c0_g1_i1]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN22620_c0_g1_i1]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
+
* [[PWY-7822]], chitin degradation III (Serratia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7822 PWY-7822]
 
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
** '''1''' reactions found over '''NA''' reactions in the full pathway
−
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
+
* [[PWY-6902]], chitin degradation II (Vibrio): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6902 PWY-6902]
−
** '''5''' reactions found over '''NA''' reactions in the full pathway
+
** '''2''' reactions found over '''NA''' reactions in the full pathway
−
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
 
−
** '''4''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
 
−
** '''6''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14908 14908]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30674 30674]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01072 R01072]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00022 R00022]
−
* UNIPROT:
+
{{#set: common name=N,N'-diacetylchitobiose &beta;-N-acetylglucosaminidase}}
−
** [http://www.uniprot.org/uniprot/P28173 P28173]
+
{{#set: common name=N-acetyl-&beta;-glucosaminidase}}
−
** [http://www.uniprot.org/uniprot/P35433 P35433]
+
{{#set: ec number=EC-3.2.1.52}}
−
** [http://www.uniprot.org/uniprot/Q06203 Q06203]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/O29388 O29388]
+
{{#set: gene associated=DN6856_c0_g1_i1}}
−
** [http://www.uniprot.org/uniprot/O67236 O67236]
+
{{#set: in pathway=PWY-7822|PWY-6902}}
−
** [http://www.uniprot.org/uniprot/P65829 P65829]
 
−
** [http://www.uniprot.org/uniprot/O57979 O57979]
 
−
** [http://www.uniprot.org/uniprot/Q9X0X4 Q9X0X4]
 
−
** [http://www.uniprot.org/uniprot/Q9RXT6 Q9RXT6]
 
−
** [http://www.uniprot.org/uniprot/Q9K0C4 Q9K0C4]
 
−
** [http://www.uniprot.org/uniprot/Q9V253 Q9V253]
 
−
** [http://www.uniprot.org/uniprot/Q9PIT3 Q9PIT3]
 
−
** [http://www.uniprot.org/uniprot/Q57657 Q57657]
 
−
** [http://www.uniprot.org/uniprot/Q9JVC9 Q9JVC9]
 
−
** [http://www.uniprot.org/uniprot/O26742 O26742]
 
−
** [http://www.uniprot.org/uniprot/P43854 P43854]
 
−
** [http://www.uniprot.org/uniprot/P35853 P35853]
 
−
** [http://www.uniprot.org/uniprot/P41390 P41390]
 
−
** [http://www.uniprot.org/uniprot/Q27601 Q27601]
 
−
** [http://www.uniprot.org/uniprot/Q38999 Q38999]
 
−
** [http://www.uniprot.org/uniprot/P04046 P04046]
 
−
** [http://www.uniprot.org/uniprot/Q55621 Q55621]
 
−
** [http://www.uniprot.org/uniprot/Q55038 Q55038]
 
−
** [http://www.uniprot.org/uniprot/Q9STG9 Q9STG9]
 
−
** [http://www.uniprot.org/uniprot/Q9T0J5 Q9T0J5]
 
−
** [http://www.uniprot.org/uniprot/P52418 P52418]
 
−
** [http://www.uniprot.org/uniprot/P52419 P52419]
 
−
** [http://www.uniprot.org/uniprot/Q22134 Q22134]
 
−
** [http://www.uniprot.org/uniprot/Q9ZB05 Q9ZB05]
 
−
** [http://www.uniprot.org/uniprot/P00497 P00497]
 
−
** [http://www.uniprot.org/uniprot/P0AG16 P0AG16]
 
−
{{#set: common name=amidophosphoribosyltransferase}}
 
−
{{#set: ec number=EC-2.4.2.14}}
 
−
{{#set: direction=REVERSIBLE}}
 
−
{{#set: gene associated=DN22620_c0_g1_i4|DN22620_c0_g1_i1}}
 
−
{{#set: in pathway=PWY-7282|PWY-6121|PWY-6122|PWY-6277}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:20, 15 January 2021

Reaction RXN-12625

  • common name:
    • N,N'-diacetylchitobiose β-N-acetylglucosaminidase
    • N-acetyl-β-glucosaminidase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7822, chitin degradation III (Serratia): PWY-7822
    • 1 reactions found over NA reactions in the full pathway
  • PWY-6902, chitin degradation II (Vibrio): PWY-6902
    • 2 reactions found over NA reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-12625&oldid=8078"