Difference between revisions of "RXN-10700"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=S-ADENMETSYN-RXN S-ADENMETSYN-RXN] == * common name: ** methionine adenosyltransferase * ec number:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10700 RXN-10700] == * common name: ** 3-oxoacyl CoA thiolase * ec number: ** [http://enzyme.exp...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=S-ADENMETSYN-RXN S-ADENMETSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10700 RXN-10700] ==
 
* common name:
 
* common name:
−
** methionine adenosyltransferase
+
** 3-oxoacyl CoA thiolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.6 EC-2.5.1.6]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
Line 11: Line 11:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[CPD-11524]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-11525]][c] '''+''' 1 [[ACETYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 L-methionine[c] '''+''' 1 H2O[c] '''=>''' 1 S-adenosyl-L-methionine[c] '''+''' 1 phosphate[c] '''+''' 1 diphosphate[c]
+
** 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN13637_c0_g1_i1]]
+
* Gene: [[DN11478_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN13637_c0_g1_i2]]
+
* Gene: [[DN11886_c0_g1_i2]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN13637_c0_g1_i5]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
+
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
−
** '''3''' reactions found over '''NA''' reactions in the full pathway
+
** '''12''' reactions found over '''NA''' reactions in the full pathway
−
* [[METHIONINE-DEG1-PWY]], L-methionine degradation I (to L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY]
 
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-5912]], 2'-deoxymugineic acid phytosiderophore biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5912 PWY-5912]
 
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[ETHYL-PWY]], ethylene biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=ETHYL-PWY ETHYL-PWY]
 
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[SAM-PWY]], S-adenosyl-L-methionine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SAM-PWY SAM-PWY]
 
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 42: Line 31:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=3-oxoacyl CoA thiolase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21081 21081]
+
{{#set: ec number=EC-2.3.1.16}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00177 R00177]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P19358 P19358]
 
−
** [http://www.uniprot.org/uniprot/P18298 P18298]
 
−
** [http://www.uniprot.org/uniprot/Q91X83 Q91X83]
 
−
** [http://www.uniprot.org/uniprot/Q9PNJ8 Q9PNJ8]
 
−
** [http://www.uniprot.org/uniprot/P54419 P54419]
 
−
** [http://www.uniprot.org/uniprot/P56460 P56460]
 
−
** [http://www.uniprot.org/uniprot/Q9JVV6 Q9JVV6]
 
−
** [http://www.uniprot.org/uniprot/Q9CEE0 Q9CEE0]
 
−
** [http://www.uniprot.org/uniprot/O50163 O50163]
 
−
** [http://www.uniprot.org/uniprot/P43762 P43762]
 
−
** [http://www.uniprot.org/uniprot/P23686 P23686]
 
−
** [http://www.uniprot.org/uniprot/P17562 P17562]
 
−
** [http://www.uniprot.org/uniprot/Q7M4Y8 Q7M4Y8]
 
−
** [http://www.uniprot.org/uniprot/Q9S992 Q9S992]
 
−
** [http://www.uniprot.org/uniprot/Q90862 Q90862]
 
−
** [http://www.uniprot.org/uniprot/P13444 P13444]
 
−
** [http://www.uniprot.org/uniprot/P31153 P31153]
 
−
** [http://www.uniprot.org/uniprot/Q00266 Q00266]
 
−
** [http://www.uniprot.org/uniprot/P43281 P43281]
 
−
** [http://www.uniprot.org/uniprot/P40320 P40320]
 
−
** [http://www.uniprot.org/uniprot/P43280 P43280]
 
−
** [http://www.uniprot.org/uniprot/P43282 P43282]
 
−
** [http://www.uniprot.org/uniprot/P48498 P48498]
 
−
** [http://www.uniprot.org/uniprot/P10659 P10659]
 
−
** [http://www.uniprot.org/uniprot/Q39465 Q39465]
 
−
** [http://www.uniprot.org/uniprot/P48466 P48466]
 
−
** [http://www.uniprot.org/uniprot/P49612 P49612]
 
−
** [http://www.uniprot.org/uniprot/P49613 P49613]
 
−
** [http://www.uniprot.org/uniprot/P78003 P78003]
 
−
** [http://www.uniprot.org/uniprot/Q49070 Q49070]
 
−
** [http://www.uniprot.org/uniprot/P0A817 P0A817]
 
−
** [http://www.uniprot.org/uniprot/P50299 P50299]
 
−
** [http://www.uniprot.org/uniprot/O22350 O22350]
 
−
** [http://www.uniprot.org/uniprot/P24260 P24260]
 
−
** [http://www.uniprot.org/uniprot/O60198 O60198]
 
−
** [http://www.uniprot.org/uniprot/Q12642 Q12642]
 
−
{{#set: common name=methionine adenosyltransferase}}
 
−
{{#set: ec number=EC-2.5.1.6}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN13637_c0_g1_i1|DN13637_c0_g1_i2|DN13637_c0_g1_i5}}
+
{{#set: gene associated=DN11478_c0_g1_i2|DN11886_c0_g1_i2}}
−
{{#set: in pathway=PWY-5041|METHIONINE-DEG1-PWY|PWY-5912|ETHYL-PWY|SAM-PWY}}
+
{{#set: in pathway=PWY-735}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:20, 15 January 2021

Reaction RXN-10700

  • common name:
    • 3-oxoacyl CoA thiolase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA[c] + 1 coenzyme A[c] => 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 12 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-10700&oldid=8101"