Difference between revisions of "TIGLYLCOA-HYDROXY-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18448 RXN-18448] == * common name: ** 2-methylbutanoate--CoA ligase * ec number: ** [http://enz...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TIGLYLCOA-HYDROXY-RXN TIGLYLCOA-HYDROXY-RXN] == * common name: ** Tiglyl-CoA hydratase ** tiglyl-Co...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18448 RXN-18448] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TIGLYLCOA-HYDROXY-RXN TIGLYLCOA-HYDROXY-RXN] ==
 
* common name:
 
* common name:
−
** 2-methylbutanoate--CoA ligase
+
** Tiglyl-CoA hydratase
 +
** tiglyl-CoA hydrase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.1 EC-6.2.1.1]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[CPD-7076]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[2-METHYL-BUTYRYL-COA]][c]
+
** 1 [[2-METHYL-3-HYDROXY-BUTYRYL-COA]][c] '''<=>''' 1 [[CPD-1083]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 2-methylbutanoate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 2-methylbutanoyl-CoA[c]
+
** 1 (2S,3S)-3-hydroxy-2-methylbutanoyl-CoA[c] '''<=>''' 1 (E)-2-methylcrotonoyl-CoA[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN21127_c0_g1_i2]]
+
* Gene: [[DN20688_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN18417_c0_g1_i2]]
+
* Gene: [[DN20688_c0_g1_i3]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN21127_c0_g1_i1]]
+
* Gene: [[DN20688_c0_g1_i5]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN18417_c0_g1_i1]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN18417_c0_g2_i1]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7857]], adlupulone and adhumulone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7857 PWY-7857]
+
* [[PWY-5109]], fermentation to 2-methylbutanoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109]
 
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
** '''1''' reactions found over '''NA''' reactions in the full pathway
 +
* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
 +
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 40: Line 37:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=2-methylbutanoate--CoA ligase}}
+
* RHEA:
−
{{#set: ec number=EC-6.2.1.1}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31122 31122]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIGAND-RXN:
−
{{#set: gene associated=DN21127_c0_g1_i2|DN18417_c0_g1_i2|DN21127_c0_g1_i1|DN18417_c0_g1_i1|DN18417_c0_g2_i1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04204 R04204]
−
{{#set: in pathway=PWY-7857}}
+
{{#set: common name=Tiglyl-CoA hydratase}}
 +
{{#set: common name=tiglyl-CoA hydrase}}
 +
{{#set: ec number=EC-4.2.1.17}}
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: gene associated=DN20688_c0_g1_i2|DN20688_c0_g1_i3|DN20688_c0_g1_i5}}
 +
{{#set: in pathway=PWY-5109|ILEUDEG-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:21, 15 January 2021

Reaction TIGLYLCOA-HYDROXY-RXN

  • common name:
    • Tiglyl-CoA hydratase
    • tiglyl-CoA hydrase
  • ec number:
  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5109, fermentation to 2-methylbutanoate: PWY-5109
    • 1 reactions found over NA reactions in the full pathway
  • ILEUDEG-PWY, L-isoleucine degradation I: ILEUDEG-PWY
    • 2 reactions found over NA reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=TIGLYLCOA-HYDROXY-RXN&oldid=8239"