Difference between revisions of "RXN0-5226"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7737 RXN-7737] == * common name: ** L,L-diaminopimelate aminotransferase * ec number: ** [http:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5226 RXN0-5226] == * common name: ** glcNAc-1,6-anhMurNAcaminidase * ec number: ** [http://enz...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7737 RXN-7737] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5226 RXN0-5226] ==
 
* common name:
 
* common name:
−
** L,L-diaminopimelate aminotransferase
+
** glcNAc-1,6-anhMurNAcaminidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.83 EC-2.6.1.83]
+
** [http://enzyme.expasy.org/EC/3.2.1.52 EC-3.2.1.52]
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[LL-DIAMINOPIMELATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CPD0-1081]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[CPD0-882]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L,L-diaminopimelate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 (S)-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 L-glutamate[c] '''+''' 1 H2O[c] '''+''' 1 H+[c]
+
** 1 N-acetyl-&beta;-D-glucosamine-1,6-anhydro-N-acetyl-&beta;-D-muramate[c] '''+''' 1 H2O[c] '''=>''' 1 N-acetyl-&beta;-D-glucosamine[c] '''+''' 1 1,6-anhydro-N-acetyl-&beta;-muramate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN20570_c0_g1_i11]]
+
* Gene: [[DN6856_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
+
* [[PWY0-1261]], anhydromuropeptides recycling I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1261 PWY0-1261]
−
** '''7''' reactions found over '''NA''' reactions in the full pathway
+
** '''1''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY-7883]], anhydromuropeptides recycling II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7883 PWY-7883]
 +
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 28: Line 30:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=glcNAc-1,6-anhMurNAcaminidase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23991 23991]
+
{{#set: ec number=EC-3.2.1.52}}
−
* LIGAND-RXN:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07613 R07613]
+
{{#set: gene associated=DN6856_c0_g1_i1}}
−
{{#set: common name=L,L-diaminopimelate aminotransferase}}
+
{{#set: in pathway=PWY0-1261|PWY-7883}}
−
{{#set: ec number=EC-2.6.1.83}}
 
−
{{#set: direction=REVERSIBLE}}
 
−
{{#set: gene associated=DN20570_c0_g1_i11}}
 
−
{{#set: in pathway=PWY-5097}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:21, 15 January 2021

Reaction RXN0-5226

  • common name:
    • glcNAc-1,6-anhMurNAcaminidase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate[c] + 1 H2O[c] => 1 N-acetyl-β-D-glucosamine[c] + 1 1,6-anhydro-N-acetyl-β-muramate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1261, anhydromuropeptides recycling I: PWY0-1261
    • 1 reactions found over NA reactions in the full pathway
  • PWY-7883, anhydromuropeptides recycling II: PWY-7883
    • 1 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN0-5226&oldid=8281"