Difference between revisions of "URIDINEKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18212 RXN-18212] == * common name: ** L-djenkolate β-lyase * ec number: ** [http://enzyme....")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINEKIN-RXN URIDINEKIN-RXN] == * common name: ** uridine kinase * ec number: ** [http://enzyme.e...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18212 RXN-18212] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINEKIN-RXN URIDINEKIN-RXN] ==
 
* common name:
 
* common name:
−
** L-djenkolate β-lyase
+
** uridine kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.4.1.6 EC-4.4.1.6]
+
** [http://enzyme.expasy.org/EC/2.7.1.48 EC-2.7.1.48]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-3740]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-19493]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[URIDINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[UMP]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 djenkolate[c] '''+''' 1 H2O[c] '''=>''' 1 S-(mercaptomethyl)-L-cysteine[c] '''+''' 1 pyruvate[c] '''+''' 1 ammonium[c]
+
** 1 ATP[c] '''+''' 1 uridine[c] '''=>''' 1 H+[c] '''+''' 1 UMP[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN12139_c0_g1_i1]]
+
* Gene: [[DN6025_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN9948_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN8803_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN3687_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN19764_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7193]], pyrimidine ribonucleosides salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7193 PWY-7193]
 +
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=L-djenkolate β-lyase}}
+
* RHEA:
−
{{#set: ec number=EC-4.4.1.6}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16826 16826]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00964 R00964]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P0A8F4 P0A8F4]
 +
** [http://www.uniprot.org/uniprot/P47622 P47622]
 +
** [http://www.uniprot.org/uniprot/Q9CF21 Q9CF21]
 +
** [http://www.uniprot.org/uniprot/P44533 P44533]
 +
** [http://www.uniprot.org/uniprot/P27515 P27515]
 +
{{#set: common name=uridine kinase}}
 +
{{#set: ec number=EC-2.7.1.48}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN12139_c0_g1_i1}}
+
{{#set: gene associated=DN6025_c0_g1_i2|DN9948_c0_g1_i1|DN8803_c0_g1_i2|DN3687_c0_g1_i1|DN19764_c0_g1_i1}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-7193}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:21, 15 January 2021

Reaction URIDINEKIN-RXN

  • common name:
    • uridine kinase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 uridine[c] => 1 H+[c] + 1 UMP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7193, pyrimidine ribonucleosides salvage I: PWY-7193
    • 2 reactions found over NA reactions in the full pathway

Reconstruction information

External links





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