Difference between revisions of "AMINOCYL-TRNA-HYDROLASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1TRANSKETO-RXN 1TRANSKETO-RXN] == * common name: ** transketolase * ec number: ** [http://enzyme.ex...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINOCYL-TRNA-HYDROLASE-RXN AMINOCYL-TRNA-HYDROLASE-RXN] == * common name: ** peptidyl-tRNA hydrola...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1TRANSKETO-RXN 1TRANSKETO-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINOCYL-TRNA-HYDROLASE-RXN AMINOCYL-TRNA-HYDROLASE-RXN] ==
 
* common name:
 
* common name:
−
** transketolase
+
** peptidyl-tRNA hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.2.1.1 EC-2.2.1.1]
+
** [http://enzyme.expasy.org/EC/3.1.1.29 EC-3.1.1.29]
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[GAP]][c] '''<=>''' 1 [[RIBOSE-5P]][c] '''+''' 1 [[XYLULOSE-5-PHOSPHATE]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[N-Substituted-Aminoacyl-tRNA]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[tRNAs]][c] '''+''' 1 [[N-Substituted-Amino-Acids]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-sedoheptulose 7-phosphate[c] '''+''' 1 D-glyceraldehyde 3-phosphate[c] '''<=>''' 1 D-ribose 5-phosphate[c] '''+''' 1 D-xylulose 5-phosphate[c]
+
** 1 H2O[c] '''+''' 1 an N-modified aminoacyl-[tRNA][c] '''=>''' 1 H+[c] '''+''' 1 an uncharged tRNA[c] '''+''' 1 an N-modified amino acid[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN23708_c0_g1_i1]]
+
* Gene: [[DN17728_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN8378_c0_g1_i3]]
+
* Gene: [[DN6362_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 
−
** '''12''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
 
−
** '''9''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch): [http://metacyc.org/META/NEW-IMAGE?object=NONOXIPENT-PWY NONOXIPENT-PWY]
 
−
** '''4''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[P21-PWY]], pentose phosphate pathway (partial): [http://metacyc.org/META/NEW-IMAGE?object=P21-PWY P21-PWY]
 
−
** '''3''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 
−
** '''9''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861]
 
−
** '''6''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
 
−
** '''9''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 43: Line 29:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10511 10511]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01641 R01641]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P29401 P29401]
+
** [http://www.uniprot.org/uniprot/Q9JV42 Q9JV42]
−
** [http://www.uniprot.org/uniprot/P33570 P33570]
+
** [http://www.uniprot.org/uniprot/P44682 P44682]
−
** [http://www.uniprot.org/uniprot/P21725 P21725]
+
** [http://www.uniprot.org/uniprot/Q9PII7 Q9PII7]
−
** [http://www.uniprot.org/uniprot/Q58094 Q58094]
+
** [http://www.uniprot.org/uniprot/Q9CJI1 Q9CJI1]
−
** [http://www.uniprot.org/uniprot/Q9JTR1 Q9JTR1]
+
** [http://www.uniprot.org/uniprot/P0A7D1 P0A7D1]
−
** [http://www.uniprot.org/uniprot/Q9CF56 Q9CF56]
+
** [http://www.uniprot.org/uniprot/Q59989 Q59989]
−
** [http://www.uniprot.org/uniprot/P21726 P21726]
+
{{#set: common name=peptidyl-tRNA hydrolase}}
−
** [http://www.uniprot.org/uniprot/P47312 P47312]
+
{{#set: ec number=EC-3.1.1.29}}
−
** [http://www.uniprot.org/uniprot/Q9PM31 Q9PM31]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P43757 P43757]
+
{{#set: gene associated=DN17728_c0_g1_i1|DN6362_c0_g1_i1}}
−
** [http://www.uniprot.org/uniprot/Q58092 Q58092]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/P45694 P45694]
 
−
** [http://www.uniprot.org/uniprot/Q52723 Q52723]
 
−
** [http://www.uniprot.org/uniprot/Q9Z475 Q9Z475]
 
−
** [http://www.uniprot.org/uniprot/P34736 P34736]
 
−
** [http://www.uniprot.org/uniprot/P33315 P33315]
 
−
** [http://www.uniprot.org/uniprot/Q42675 Q42675]
 
−
** [http://www.uniprot.org/uniprot/Q42676 Q42676]
 
−
** [http://www.uniprot.org/uniprot/Q42677 Q42677]
 
−
** [http://www.uniprot.org/uniprot/P46708 P46708]
 
−
** [http://www.uniprot.org/uniprot/P75611 P75611]
 
−
** [http://www.uniprot.org/uniprot/P73282 P73282]
 
−
** [http://www.uniprot.org/uniprot/Q49047 Q49047]
 
−
** [http://www.uniprot.org/uniprot/O20250 O20250]
 
−
** [http://www.uniprot.org/uniprot/O78327 O78327]
 
−
** [http://www.uniprot.org/uniprot/Q9URM2 Q9URM2]
 
−
** [http://www.uniprot.org/uniprot/Q9RFB7 Q9RFB7]
 
−
** [http://www.uniprot.org/uniprot/P23254 P23254]
 
−
** [http://www.uniprot.org/uniprot/P27302 P27302]
 
−
** [http://www.uniprot.org/uniprot/P29277 P29277]
 
−
** [http://www.uniprot.org/uniprot/P22976 P22976]
 
−
{{#set: common name=transketolase}}
 
−
{{#set: ec number=EC-2.2.1.1}}
 
−
{{#set: direction=REVERSIBLE}}
 
−
{{#set: gene associated=DN23708_c0_g1_i1|DN8378_c0_g1_i3}}
 
−
{{#set: in pathway=CALVIN-PWY|PWY-5723|NONOXIPENT-PWY|P21-PWY|P124-PWY|PWY-1861|P185-PWY}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:21, 15 January 2021

Reaction AMINOCYL-TRNA-HYDROLASE-RXN

  • common name:
    • peptidyl-tRNA hydrolase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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