Difference between revisions of "UDPKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11236 RXN-11236] == * common name: ** nitrate reductase * ec number: ** [http://enzyme.expasy.o...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPKIN-RXN UDPKIN-RXN] == * common name: ** UDP kinase * ec number: ** [http://enzyme.expasy.org/EC...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11236 RXN-11236] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPKIN-RXN UDPKIN-RXN] ==
 
* common name:
 
* common name:
−
** nitrate reductase
+
** UDP kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.7.5.1 EC-1.7.5.1]
+
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ETR-Quinols]][c] '''+''' 1 [[NITRATE]][c] '''<=>''' 1 [[ETR-Quinones]][c] '''+''' 1 [[NITRITE]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[UDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[UTP]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an electron-transfer quinol[c] '''+''' 1 nitrate[c] '''<=>''' 1 an electron-transfer quinone[c] '''+''' 1 nitrite[c] '''+''' 1 H2O[c]
+
** 1 UDP[c] '''+''' 1 ATP[c] '''=>''' 1 UTP[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN19698_c0_g2_i1]]
+
* Gene: [[DN17885_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN8917_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN20568_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6748]], nitrate reduction VII (denitrification): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6748 PWY-6748]
+
* [[PWY-7176]], UTP and CTP de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7176 PWY-7176]
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
+
** '''3''' reactions found over '''NA''' reactions in the full pathway
−
* [[DENITRIFICATION-PWY]], nitrate reduction I (denitrification): [http://metacyc.org/META/NEW-IMAGE?object=DENITRIFICATION-PWY DENITRIFICATION-PWY]
 
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=nitrate reductase}}
+
* RHEA:
−
{{#set: ec number=EC-1.7.5.1}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25099 25099]
−
{{#set: direction=REVERSIBLE}}
+
* LIGAND-RXN:
−
{{#set: gene associated=DN19698_c0_g2_i1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00156 R00156]
−
{{#set: in pathway=PWY-6748|DENITRIFICATION-PWY}}
+
{{#set: common name=UDP kinase}}
 +
{{#set: ec number=EC-2.7.4.6}}
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: gene associated=DN17885_c0_g1_i1|DN8917_c0_g1_i1|DN20568_c0_g1_i2}}
 +
{{#set: in pathway=PWY-7176}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction UDPKIN-RXN

  • common name:
    • UDP kinase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP[c] + 1 ATP[c] => 1 UTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7176, UTP and CTP de novo biosynthesis: PWY-7176
    • 3 reactions found over NA reactions in the full pathway

Reconstruction information

External links





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