Difference between revisions of "RXN-18511"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--TRNA-LIGASE-RXN ALANINE--TRNA-LIGASE-RXN] == * common name: ** alanine—tRNA ligase *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18511 RXN-18511] == * ec number: ** [http://enzyme.expasy.org/EC/2.7.7.2 EC-2.7.7.2] * directio...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--TRNA-LIGASE-RXN ALANINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18511 RXN-18511] ==
−
* common name:
 
−
** alanine—tRNA ligase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.7 EC-6.1.1.7]
+
** [http://enzyme.expasy.org/EC/2.7.7.2 EC-2.7.7.2]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ALA-tRNAs]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Charged-ALA-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[CPD-19839]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-19840]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a tRNAAla[c] '''+''' 1 L-alanine[c] '''+''' 1 ATP[c] '''=>''' 1 an L-alanyl-[tRNAAla][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
+
** 1 roseoflavin 5'-phosphate[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''=>''' 1 roseoflavin adenine dinucleotide[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN10358_c0_g1_i1]]
+
* Gene: [[DN19185_c0_g1_i2]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN10562_c0_g1_i1]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 
−
** '''20''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 31: Line 24:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: ec number=EC-2.7.7.2}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12541 12541]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03038 R03038]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P56452 P56452]
 
−
** [http://www.uniprot.org/uniprot/O27718 O27718]
 
−
** [http://www.uniprot.org/uniprot/O34526 O34526]
 
−
** [http://www.uniprot.org/uniprot/P47534 P47534]
 
−
** [http://www.uniprot.org/uniprot/O58035 O58035]
 
−
** [http://www.uniprot.org/uniprot/Q9PI05 Q9PI05]
 
−
** [http://www.uniprot.org/uniprot/Q9JTG4 Q9JTG4]
 
−
** [http://www.uniprot.org/uniprot/Q57984 Q57984]
 
−
** [http://www.uniprot.org/uniprot/O51238 O51238]
 
−
** [http://www.uniprot.org/uniprot/Q9CEW0 Q9CEW0]
 
−
** [http://www.uniprot.org/uniprot/O83980 O83980]
 
−
** [http://www.uniprot.org/uniprot/Q9X1B6 Q9X1B6]
 
−
** [http://www.uniprot.org/uniprot/Q9ZJY5 Q9ZJY5]
 
−
** [http://www.uniprot.org/uniprot/O67323 O67323]
 
−
** [http://www.uniprot.org/uniprot/Q9ZCA4 Q9ZCA4]
 
−
** [http://www.uniprot.org/uniprot/Q9Z714 Q9Z714]
 
−
** [http://www.uniprot.org/uniprot/P49588 P49588]
 
−
** [http://www.uniprot.org/uniprot/P43815 P43815]
 
−
** [http://www.uniprot.org/uniprot/P50475 P50475]
 
−
** [http://www.uniprot.org/uniprot/P24075 P24075]
 
−
** [http://www.uniprot.org/uniprot/P27866 P27866]
 
−
** [http://www.uniprot.org/uniprot/P35029 P35029]
 
−
** [http://www.uniprot.org/uniprot/P40825 P40825]
 
−
** [http://www.uniprot.org/uniprot/P75368 P75368]
 
−
** [http://www.uniprot.org/uniprot/Q48976 Q48976]
 
−
** [http://www.uniprot.org/uniprot/P00957 P00957]
 
−
** [http://www.uniprot.org/uniprot/P21894 P21894]
 
−
** [http://www.uniprot.org/uniprot/O50189 O50189]
 
−
{{#set: common name=alanine—tRNA ligase}}
 
−
{{#set: ec number=EC-6.1.1.7}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN10358_c0_g1_i1|DN10562_c0_g1_i1}}
+
{{#set: gene associated=DN19185_c0_g1_i2}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction RXN-18511

  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 roseoflavin 5'-phosphate[c] + 1 ATP[c] + 1 H+[c] => 1 roseoflavin adenine dinucleotide[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-18511&oldid=8887"