Difference between revisions of "5.3.4.1-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTMPKI-RXN DTMPKI-RXN] == * common name: ** dTMP kinase * ec number: ** [http://enzyme.expasy.org/E...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.3.4.1-RXN 5.3.4.1-RXN] == * common name: ** protein disulfide isomerase * ec number: ** [http://e...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTMPKI-RXN DTMPKI-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.3.4.1-RXN 5.3.4.1-RXN] ==
 
* common name:
 
* common name:
−
** dTMP kinase
+
** protein disulfide isomerase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.12 EC-2.7.4.12]
+
** [http://enzyme.expasy.org/EC/5.3.4.1 EC-5.3.4.1]
−
** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13]
 
−
** [http://enzyme.expasy.org/EC/2.7.4.9 EC-2.7.4.9]
 
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[TMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[TDP]][c]
+
** 1 [[Proteins-with-incorrect-disulfides]][c] '''<=>''' 1 [[Proteins-with-correct-disulfides]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 dTMP[c] '''=>''' 1 ADP[c] '''+''' 1 dTDP[c]
+
** 1 a protein with incorrect disulfide bonds[c] '''<=>''' 1 a protein with correct disulfide bonds[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN16998_c0_g1_i2]]
+
* Gene: [[DN21894_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN6565_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN21894_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
 
−
** '''12''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187]
 
−
** '''4''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
 
−
** '''9''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
 
−
** '''6''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
 
−
** '''6''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 
−
** '''8''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7197 PWY-7197]
 
−
** '''3''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 42: Line 32:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13518 13518]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02094 R02094]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q57741 Q57741]
+
** [http://www.uniprot.org/uniprot/P13667 P13667]
−
** [http://www.uniprot.org/uniprot/Q9PPF3 Q9PPF3]
+
** [http://www.uniprot.org/uniprot/P11598 P11598]
−
** [http://www.uniprot.org/uniprot/P0A720 P0A720]
+
** [http://www.uniprot.org/uniprot/P21195 P21195]
−
** [http://www.uniprot.org/uniprot/Q8X8H7 Q8X8H7]
+
** [http://www.uniprot.org/uniprot/P0AEG4 P0AEG4]
−
** [http://www.uniprot.org/uniprot/Q9JVE7 Q9JVE7]
+
** [http://www.uniprot.org/uniprot/P29828 P29828]
−
** [http://www.uniprot.org/uniprot/P33803 P33803]
+
** [http://www.uniprot.org/uniprot/P32557 P32557]
−
** [http://www.uniprot.org/uniprot/P42490 P42490]
+
** [http://www.uniprot.org/uniprot/Q27780 Q27780]
−
** [http://www.uniprot.org/uniprot/P00572 P00572]
+
** [http://www.uniprot.org/uniprot/P31810 P31810]
−
** [http://www.uniprot.org/uniprot/Q80HT9 Q80HT9]
+
** [http://www.uniprot.org/uniprot/Q9PDE2 Q9PDE2]
−
** [http://www.uniprot.org/uniprot/P68693 P68693]
+
** [http://www.uniprot.org/uniprot/O27777 O27777]
−
** [http://www.uniprot.org/uniprot/P23919 P23919]
+
** [http://www.uniprot.org/uniprot/Q9JSN7 Q9JSN7]
−
** [http://www.uniprot.org/uniprot/P36590 P36590]
+
** [http://www.uniprot.org/uniprot/P45111 P45111]
−
** [http://www.uniprot.org/uniprot/Q9RA29 Q9RA29]
+
** [http://www.uniprot.org/uniprot/P0AEG6 P0AEG6]
−
** [http://www.uniprot.org/uniprot/O81650 O81650]
+
** [http://www.uniprot.org/uniprot/O68904 O68904]
−
{{#set: common name=dTMP kinase}}
+
** [http://www.uniprot.org/uniprot/Q9PCE7 Q9PCE7]
−
{{#set: ec number=EC-2.7.4.12}}
+
** [http://www.uniprot.org/uniprot/Q9PDF5 Q9PDF5]
−
{{#set: ec number=EC-2.7.4.13}}
+
** [http://www.uniprot.org/uniprot/Q9JSY5 Q9JSY5]
−
{{#set: ec number=EC-2.7.4.9}}
+
** [http://www.uniprot.org/uniprot/Q9KPF0 Q9KPF0]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.uniprot.org/uniprot/P95460 P95460]
−
{{#set: gene associated=DN16998_c0_g1_i2}}
+
** [http://www.uniprot.org/uniprot/P05307 P05307]
−
{{#set: in pathway=PWY0-166|PWY-7187|PWY-7184|PWY-7198|PWY-7210|PWY-6545|PWY-7197}}
+
** [http://www.uniprot.org/uniprot/P17967 P17967]
 +
** [http://www.uniprot.org/uniprot/P09102 P09102]
 +
** [http://www.uniprot.org/uniprot/P07237 P07237]
 +
** [http://www.uniprot.org/uniprot/P08003 P08003]
 +
** [http://www.uniprot.org/uniprot/Q922C8 Q922C8]
 +
** [http://www.uniprot.org/uniprot/P04785 P04785]
 +
** [http://www.uniprot.org/uniprot/P55059 P55059]
 +
** [http://www.uniprot.org/uniprot/Q27553 Q27553]
 +
** [http://www.uniprot.org/uniprot/P30101 P30101]
 +
** [http://www.uniprot.org/uniprot/Q7M1Q4 Q7M1Q4]
 +
** [http://www.uniprot.org/uniprot/Q04815 Q04815]
 +
** [http://www.uniprot.org/uniprot/P39691 P39691]
 +
** [http://www.uniprot.org/uniprot/P34329 P34329]
 +
** [http://www.uniprot.org/uniprot/Q12730 Q12730]
 +
** [http://www.uniprot.org/uniprot/Q43116 Q43116]
 +
** [http://www.uniprot.org/uniprot/Q9TWZ1 Q9TWZ1]
 +
** [http://www.uniprot.org/uniprot/P52588 P52588]
 +
** [http://www.uniprot.org/uniprot/Q17967 Q17967]
 +
** [http://www.uniprot.org/uniprot/P52234 P52234]
 +
** [http://www.uniprot.org/uniprot/O22263 O22263]
 +
** [http://www.uniprot.org/uniprot/P93358 P93358]
 +
** [http://www.uniprot.org/uniprot/P80284 P80284]
 +
** [http://www.uniprot.org/uniprot/P52589 P52589]
 +
** [http://www.uniprot.org/uniprot/O48949 O48949]
 +
** [http://www.uniprot.org/uniprot/P38661 P38661]
 +
** [http://www.uniprot.org/uniprot/O13704 O13704]
 +
** [http://www.uniprot.org/uniprot/O13811 O13811]
 +
** [http://www.uniprot.org/uniprot/Q10057 Q10057]
 +
** [http://www.uniprot.org/uniprot/Q92249 Q92249]
 +
{{#set: common name=protein disulfide isomerase}}
 +
{{#set: ec number=EC-5.3.4.1}}
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: gene associated=DN21894_c0_g1_i2|DN6565_c0_g1_i1|DN21894_c0_g1_i1}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction 5.3.4.1-RXN

  • common name:
    • protein disulfide isomerase
  • ec number:
  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=5.3.4.1-RXN&oldid=8984"