Difference between revisions of "MALONYL-COA-ACP-TRANSACYL-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] == * common name: ** O-succinylhomoserine(thiol)-lya...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALONYL-COA-ACP-TRANSACYL-RXN MALONYL-COA-ACP-TRANSACYL-RXN] == * common name: ** [acyl-carrier-pro...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALONYL-COA-ACP-TRANSACYL-RXN MALONYL-COA-ACP-TRANSACYL-RXN] ==
 
* common name:
 
* common name:
−
** O-succinylhomoserine(thiol)-lyase
+
** [acyl-carrier-protein] S-malonyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.48 EC-2.5.1.48]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.39 EC-2.3.1.39]
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CYS]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''<=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[ACP]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[MALONYL-ACP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-cysteine[c] '''+''' 1 O-succinyl-L-homoserine[c] '''<=>''' 1 L-cystathionine[c] '''+''' 1 succinate[c] '''+''' 1 H+[c]
+
** 1 a holo-[acyl-carrier protein][c] '''+''' 1 malonyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 a malonyl-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN15452_c0_g1_i2]]
+
* Gene: [[DN20375_c0_g1_i4]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN15452_c0_g1_i1]]
+
* Gene: [[DN20375_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN18128_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN11444_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN25390_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN20375_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN6632_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN13183_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
+
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
+
** '''7''' reactions found over '''NA''' reactions in the full pathway
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
+
* [[PWY-4381]], fatty acid biosynthesis initiation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381]
−
** '''4''' reactions found over '''NA''' reactions in the full pathway
+
** '''1''' reactions found over '''NA''' reactions in the full pathway
−
* [[PWY-801]], homocysteine and cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
+
* [[PWY-6799]], fatty acid biosynthesis (plant mitochondria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6799 PWY-6799]
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
+
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 35: Line 55:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01626 R01626]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2]
+
** [http://www.uniprot.org/uniprot/P72391 P72391]
−
** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6]
+
** [http://www.uniprot.org/uniprot/P49327 P49327]
−
** [http://www.uniprot.org/uniprot/P38675 P38675]
+
** [http://www.uniprot.org/uniprot/O34825 O34825]
−
** [http://www.uniprot.org/uniprot/P24601 P24601]
+
** [http://www.uniprot.org/uniprot/Q9RT24 Q9RT24]
−
** [http://www.uniprot.org/uniprot/P00935 P00935]
+
** [http://www.uniprot.org/uniprot/Q9JW58 Q9JW58]
−
** [http://www.uniprot.org/uniprot/O04981 O04981]
+
** [http://www.uniprot.org/uniprot/P0AAI9 P0AAI9]
−
** [http://www.uniprot.org/uniprot/O04982 O04982]
+
** [http://www.uniprot.org/uniprot/O24916 O24916]
−
** [http://www.uniprot.org/uniprot/O81334 O81334]
+
** [http://www.uniprot.org/uniprot/Q9JXR4 Q9JXR4]
−
** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9]
+
** [http://www.uniprot.org/uniprot/Q9ZCJ6 Q9ZCJ6]
−
{{#set: common name=O-succinylhomoserine(thiol)-lyase}}
+
** [http://www.uniprot.org/uniprot/Q9YBK5 Q9YBK5]
−
{{#set: ec number=EC-2.5.1.48}}
+
** [http://www.uniprot.org/uniprot/Q9PJ11 Q9PJ11]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/P43712 P43712]
−
{{#set: gene associated=DN15452_c0_g1_i2|DN15452_c0_g1_i1}}
+
** [http://www.uniprot.org/uniprot/Q9Z8P1 Q9Z8P1]
−
{{#set: in pathway=PWY-I9|HOMOSER-METSYN-PWY|PWY-801}}
+
** [http://www.uniprot.org/uniprot/O67041 O67041]
 +
** [http://www.uniprot.org/uniprot/Q9ZMY1 Q9ZMY1]
 +
** [http://www.uniprot.org/uniprot/Q9PKF6 Q9PKF6]
 +
** [http://www.uniprot.org/uniprot/P63458 P63458]
 +
** [http://www.uniprot.org/uniprot/O84241 O84241]
 +
** [http://www.uniprot.org/uniprot/Q9WZQ5 Q9WZQ5]
 +
** [http://www.uniprot.org/uniprot/P71019 P71019]
 +
** [http://www.uniprot.org/uniprot/P07149 P07149]
 +
** [http://www.uniprot.org/uniprot/P73242 P73242]
 +
** [http://www.uniprot.org/uniprot/Q8RU07 Q8RU07]
 +
** [http://www.uniprot.org/uniprot/Q54205 Q54205]
 +
** [http://www.uniprot.org/uniprot/O54437 O54437]
 +
** [http://www.uniprot.org/uniprot/Q56692 Q56692]
 +
** [http://www.uniprot.org/uniprot/O13698 O13698]
 +
** [http://www.uniprot.org/uniprot/Q9RA34 Q9RA34]
 +
** [http://www.uniprot.org/uniprot/O69476 O69476]
 +
** [http://www.uniprot.org/uniprot/P12276 P12276]
 +
** [http://www.uniprot.org/uniprot/P12785 P12785]
 +
{{#set: common name=[acyl-carrier-protein] S-malonyltransferase}}
 +
{{#set: ec number=EC-2.3.1.86}}
 +
{{#set: ec number=EC-2.3.1.85}}
 +
{{#set: ec number=EC-2.3.1.39}}
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: gene associated=DN20375_c0_g1_i4|DN20375_c0_g1_i2|DN18128_c0_g1_i1|DN11444_c0_g1_i1|DN25390_c0_g1_i1|DN20375_c0_g1_i1|DN6632_c0_g1_i1|DN13183_c0_g1_i1}}
 +
{{#set: in pathway=PWY-7388|PWY-4381|PWY-6799}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction MALONYL-COA-ACP-TRANSACYL-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a holo-[acyl-carrier protein][c] + 1 malonyl-CoA[c] => 1 coenzyme A[c] + 1 a malonyl-[acp][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
    • 7 reactions found over NA reactions in the full pathway
  • PWY-4381, fatty acid biosynthesis initiation I: PWY-4381
    • 1 reactions found over NA reactions in the full pathway
  • PWY-6799, fatty acid biosynthesis (plant mitochondria): PWY-6799
    • 1 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Property "Common name" (as page type) with input value "acyl-carrier-protein] S-malonyltransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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