Difference between revisions of "RXN0-2382"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18202 RXN-18202] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ide...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2382 RXN0-2382] == * common name: ** tryptophan synthase * ec number: ** [http://enzyme.expasy...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18202 RXN-18202] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2382 RXN0-2382] ==
 +
* common name:
 +
** tryptophan synthase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.122 EC-4.2.1.122]
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPDQT-39]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-19488]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[SER]][c] '''+''' 1 [[INDOLE]][c] '''=>''' 1 [[TRP]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-[(6'-methylthio)hexyl]malate[c] '''+''' 1 NAD+[c] '''<=>''' 1 3-isopropyl-9-(methylthio)-2-oxononanoate[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
+
** 1 L-serine[c] '''+''' 1 indole[c] '''=>''' 1 L-tryptophan[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN21092_c0_g1_i1]]
+
* Gene: [[DN19913_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN17689_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN15376_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN15376_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWYQT-4450]], aliphatic glucosinolate biosynthesis, side chain elongation cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450]
+
* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
 
** '''5''' reactions found over '''NA''' reactions in the full pathway
 
** '''5''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: gene associated=DN21092_c0_g1_i1}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26435 26435]
−
{{#set: in pathway=PWYQT-4450}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00674 R00674]
 +
{{#set: common name=tryptophan synthase}}
 +
{{#set: ec number=EC-4.2.1.122}}
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: gene associated=DN19913_c0_g1_i1|DN17689_c0_g1_i1|DN15376_c0_g1_i2|DN15376_c0_g1_i1}}
 +
{{#set: in pathway=TRPSYN-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction RXN0-2382

  • common name:
    • tryptophan synthase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-serine[c] + 1 indole[c] => 1 L-tryptophan[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
    • 5 reactions found over NA reactions in the full pathway

Reconstruction information

External links





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