Difference between revisions of "RXN-12392"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETATE--COA-LIGASE-RXN ACETATE--COA-LIGASE-RXN] == * common name: ** acetyl-CoA synthetase (AMP-fo...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12392 RXN-12392] == * common name: ** linear malto-oligosaccharide phosphorylase * ec number: *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETATE--COA-LIGASE-RXN ACETATE--COA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12392 RXN-12392] ==
 
* common name:
 
* common name:
−
** acetyl-CoA synthetase (AMP-forming)
+
** linear malto-oligosaccharide phosphorylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.1 EC-6.2.1.1]
+
** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
Line 11: Line 11:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[ACET]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[Linear-Malto-Oligosaccharides]][c] '''+''' 1 [[Pi]][c] '''=>''' 1 [[Linear-Malto-Oligosaccharides]][c] '''+''' 1 [[GLC-1-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 acetate[c] '''+''' 1 ATP[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
+
** 1 a linear malto-oligosaccharide[c] '''+''' 1 phosphate[c] '''=>''' 1 a linear malto-oligosaccharide[c] '''+''' 1 α-D-glucopyranose 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN18417_c0_g1_i2]]
+
* Gene: [[DN22830_c0_g1_i3]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN21127_c0_g1_i1]]
+
* Gene: [[DN21046_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN18417_c0_g1_i1]]
+
* Gene: [[DN8913_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN18417_c0_g2_i1]]
+
* Gene: [[DN16474_c0_g2_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN21127_c0_g1_i2]]
+
* Gene: [[DN8913_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN22830_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN18971_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN15931_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN13823_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-161]], ethanol degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-161 PWY66-161]
 
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY66-162]], ethanol degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-162 PWY66-162]
 
−
** '''3''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118]
 
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY66-21]], ethanol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-21 PWY66-21]
 
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY0-1313]], acetate conversion to acetyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1313 PWY0-1313]
 
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
 
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 50: Line 50:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=linear malto-oligosaccharide phosphorylase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23176 23176]
+
{{#set: ec number=EC-2.4.1.1}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00235 R00235]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P27095 P27095]
 
−
** [http://www.uniprot.org/uniprot/P31638 P31638]
 
−
** [http://www.uniprot.org/uniprot/Q12662 Q12662]
 
−
** [http://www.uniprot.org/uniprot/P28812 P28812]
 
−
** [http://www.uniprot.org/uniprot/P27550 P27550]
 
−
** [http://www.uniprot.org/uniprot/O34613 O34613]
 
−
** [http://www.uniprot.org/uniprot/Q9PMD2 Q9PMD2]
 
−
** [http://www.uniprot.org/uniprot/P36333 P36333]
 
−
** [http://www.uniprot.org/uniprot/Q01574 Q01574]
 
−
** [http://www.uniprot.org/uniprot/P39062 P39062]
 
−
** [http://www.uniprot.org/uniprot/Q01576 Q01576]
 
−
** [http://www.uniprot.org/uniprot/P52910 P52910]
 
−
** [http://www.uniprot.org/uniprot/Q55404 Q55404]
 
−
** [http://www.uniprot.org/uniprot/P16928 P16928]
 
−
** [http://www.uniprot.org/uniprot/P16929 P16929]
 
−
** [http://www.uniprot.org/uniprot/O68040 O68040]
 
−
** [http://www.uniprot.org/uniprot/P78773 P78773]
 
−
{{#set: common name=acetyl-CoA synthetase (AMP-forming)}}
 
−
{{#set: ec number=EC-6.2.1.1}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN18417_c0_g1_i2|DN21127_c0_g1_i1|DN18417_c0_g1_i1|DN18417_c0_g2_i1|DN21127_c0_g1_i2}}
+
{{#set: gene associated=DN22830_c0_g1_i3|DN21046_c0_g1_i1|DN8913_c0_g1_i2|DN16474_c0_g2_i1|DN8913_c0_g1_i1|DN22830_c0_g1_i1|DN18971_c0_g1_i1|DN15931_c0_g1_i1|DN13823_c0_g1_i1}}
−
{{#set: in pathway=PWY66-161|PWY66-162|PWY-7118|PWY66-21|PWY0-1313|PWY-6672}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:23, 15 January 2021

Reaction RXN-12392

  • common name:
    • linear malto-oligosaccharide phosphorylase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-12392&oldid=9113"