Difference between revisions of "Category:Pathway"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN0-5393 == * direction: ** left-to-right * common-name: ** beta-hydroxydecanoyl thiol ester dehydrase, faba/fabz ** clpp/crotonase-like dom...")
(Created page with "Category:reaction == Reaction HOMOACONITATE-HYDRATASE-RXN == * direction: ** left-to-right * common-name: ** homoaconitate hydratase * ec-number: ** [http://enzyme.expasy....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-5393 ==
+
== Reaction HOMOACONITATE-HYDRATASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** beta-hydroxydecanoyl thiol ester dehydrase, faba/fabz
+
** homoaconitate hydratase
−
** clpp/crotonase-like domain
 
−
** enoyl-coenzyme a hydratase/3-hydroxyacyl coenzyme a dehydrogenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
+
** [http://enzyme.expasy.org/EC/4.2.1.36 ec-4.2.1.36]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD0-1162]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-1163]][c]
+
* 1 [[HOMO-CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HOMO-I-CIT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-16_003560]]
+
* Gene: [[Ec-13_001950]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-16_001250]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[Ec-06_001380]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[Ec-14_006530]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1337]], oleate β-oxidation:
+
* [[PWY-3081]], L-lysine biosynthesis V:
−
** '''1''' reactions found over '''35''' reactions in the full pathway
+
** '''3''' reactions found over '''10''' reactions in the full pathway
 +
* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV:
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[P241-PWY]], coenzyme B biosynthesis:
 +
** '''2''' reactions found over '''16''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15488 15488]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04371 R04371]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q58409 Q58409]
 +
** [http://www.uniprot.org/uniprot/P49367 P49367]
 +
** [http://www.uniprot.org/uniprot/Q9UT74 Q9UT74]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=enoyl-coenzyme a hydratase/3-hydroxyacyl coenzyme a dehydrogenase|clpp/crotonase-like domain|beta-hydroxydecanoyl thiol ester dehydrase, faba/fabz}}
+
{{#set: common-name=homoaconitate hydratase}}
−
{{#set: ec-number=ec-4.2.1.17}}
+
{{#set: ec-number=ec-4.2.1.36}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 09:25, 14 January 2021

Reaction HOMOACONITATE-HYDRATASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • homoaconitate hydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3081, L-lysine biosynthesis V:
    • 3 reactions found over 10 reactions in the full pathway
  • LYSINE-AMINOAD-PWY, L-lysine biosynthesis IV:
    • 3 reactions found over 9 reactions in the full pathway
  • P241-PWY, coenzyme B biosynthesis:
    • 2 reactions found over 16 reactions in the full pathway

Reconstruction information

External links





Pages in category "Pathway"

The following 200 pages are in this category, out of 1,103 total.

(previous page) (next page)

P

2

G

A

I

T

B

C

L

D

E

F

S

H

M

N

O

(previous page) (next page)
Retrieved from "http://gem-aureme.genouest.org//esilgem/index.php?title=Category:Pathway&oldid=58400"