Difference between revisions of "1.2.4.4-RXN"

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(Created page with "Category:reaction == Reaction RXN-16380 == * direction: ** left-to-right * common-name: ** long chain acyl-coa synthetase * ec-number: ** [http://enzyme.expasy.org/EC/6.2....")
(Created page with "Category:reaction == Reaction 1.2.4.4-RXN == * direction: ** reversible * common-name: ** dehydrogenase, e1 component ** branched chain alpha-keto acid dehydrogenase e1 be...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16380 ==
+
== Reaction 1.2.4.4-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** long chain acyl-coa synthetase
+
** dehydrogenase, e1 component
 +
** branched chain alpha-keto acid dehydrogenase e1 beta subunit
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[STEARIC_ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[STEAROYL-COA]][c]
+
* 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BCAA-dehydrogenase-2MP-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-01_001560]]
+
* Gene: [[Ec-06_009010]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[Ec-02_006430]]
+
* Gene: [[Ec-10_006360]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-12_008720]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[Ec-03_003710]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5989]], stearate biosynthesis II (bacteria and plants):
+
* [[PWY-5046]], 2-oxoisovalerate decarboxylation to isobutanoyl-CoA:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR99164
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: direction=left-to-right}}
+
* METANETX-RXN : MNXR114962
−
{{#set: common-name=long chain acyl-coa synthetase}}
+
* RHEA:
−
{{#set: ec-number=ec-6.2.1.3}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13460 13460]
−
{{#set: nb gene associated=4}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01701 R01701]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P21839 P21839]
 +
** [http://www.uniprot.org/uniprot/P21953 P21953]
 +
** [http://www.uniprot.org/uniprot/P37940 P37940]
 +
** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
 +
** [http://www.uniprot.org/uniprot/P37941 P37941]
 +
** [http://www.uniprot.org/uniprot/P11178 P11178]
 +
** [http://www.uniprot.org/uniprot/P12694 P12694]
 +
** [http://www.uniprot.org/uniprot/P09061 P09061]
 +
** [http://www.uniprot.org/uniprot/P09060 P09060]
 +
** [http://www.uniprot.org/uniprot/P11960 P11960]
 +
** [http://www.uniprot.org/uniprot/O84344 O84344]
 +
** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
 +
** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
 +
** [http://www.uniprot.org/uniprot/P35738 P35738]
 +
** [http://www.uniprot.org/uniprot/P50136 P50136]
 +
** [http://www.uniprot.org/uniprot/O48615 O48615]
 +
** [http://www.uniprot.org/uniprot/O03849 O03849]
 +
** [http://www.uniprot.org/uniprot/Q53592 Q53592]
 +
** [http://www.uniprot.org/uniprot/Q53593 Q53593]
 +
** [http://www.uniprot.org/uniprot/O82450 O82450]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=dehydrogenase, e1 component|branched chain alpha-keto acid dehydrogenase e1 beta subunit}}
 +
{{#set: ec-number=ec-1.2.4.4}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Latest revision as of 09:05, 18 March 2021

Reaction 1.2.4.4-RXN

  • direction:
    • reversible
  • common-name:
    • dehydrogenase, e1 component
    • branched chain alpha-keto acid dehydrogenase e1 beta subunit
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5046, 2-oxoisovalerate decarboxylation to isobutanoyl-CoA:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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