Difference between revisions of "RXN-14997"

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(Created page with "Category:reaction == Reaction ARGSUCCINLYA-RXN == * direction: ** reversible * common-name: ** argininosuccinate lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.2.1...")
 
(Created page with "Category:reaction == Reaction 2.4.1.119-RXN == * direction: ** left-to-right * common-name: ** dad/ost2 ** dolichyl-diphosphooligosaccharide--protein glycosyltransferase s...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ARGSUCCINLYA-RXN ==
+
== Reaction 2.4.1.119-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** argininosuccinate lyase
+
** dad/ost2
 +
** dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit swp1
 +
** oligosaccharyl transferase complex, subunit ost3/ost6
 +
** ribophorin i
 +
** dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit wbp1
 +
** dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a, c-terminal fragment, family gt66
 +
** dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a, n-terminal fragment, family gt66
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.3.2.1 ec-4.3.2.1]
+
** [http://enzyme.expasy.org/EC/2.4.99.18 ec-2.4.99.18]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[ARG]][c] '''+''' 1 [[FUM]][c]
+
* 1 [[CPD-18076]][c] '''+''' 1 [[Protein-L-Asparagine]][c] '''=>''' 1 [[CPD-18077]][c] '''+''' 1 [[CPD-224]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-12_005890]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[Ec-00_007050]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-10_002870]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-09_000810]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-07_004230]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-22_002490]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[Ec-00_007060]]
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-14_004370]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-4983]], nitric oxide biosynthesis II (mammals):
+
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic):
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''19''' reactions found over '''19''' reactions in the full pathway
−
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-4984]], urea cycle:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24023 24023]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50349 50349]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P50987 P50987]
+
** [http://www.uniprot.org/uniprot/P39656 P39656]
−
** [http://www.uniprot.org/uniprot/Q46104 Q46104]
+
** [http://www.uniprot.org/uniprot/P48440 P48440]
−
** [http://www.uniprot.org/uniprot/P11447 P11447]
+
** [http://www.uniprot.org/uniprot/P41543 P41543]
−
** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7]
+
** [http://www.uniprot.org/uniprot/P80896 P80896]
−
** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76]
+
** [http://www.uniprot.org/uniprot/P80897 P80897]
−
** [http://www.uniprot.org/uniprot/P44314 P44314]
+
** [http://www.uniprot.org/uniprot/P48439 P48439]
−
** [http://www.uniprot.org/uniprot/Q58201 Q58201]
+
** [http://www.uniprot.org/uniprot/P46964 P46964]
−
** [http://www.uniprot.org/uniprot/P33110 P33110]
+
** [http://www.uniprot.org/uniprot/Q92316 Q92316]
−
** [http://www.uniprot.org/uniprot/Q01592 Q01592]
+
** [http://www.uniprot.org/uniprot/Q10176 Q10176]
−
** [http://www.uniprot.org/uniprot/P40369 P40369]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P50988 P50988]
+
{{#set: common-name=oligosaccharyl transferase complex, subunit ost3/ost6|dad/ost2|dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a, n-terminal fragment, family gt66|dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit wbp1|dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit swp1|dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a, c-terminal fragment, family gt66|ribophorin i}}
−
** [http://www.uniprot.org/uniprot/P73257 P73257]
+
{{#set: ec-number=ec-2.4.99.18}}
−
** [http://www.uniprot.org/uniprot/P50514 P50514]
+
{{#set: nb gene associated=7}}
−
** [http://www.uniprot.org/uniprot/P04076 P04076]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P04424 P04424]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P20673 P20673]
+
{{#set: reconstruction tool=pathwaytools}}
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=argininosuccinate lyase}}
 
−
{{#set: ec-number=ec-4.3.2.1}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=6}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 16:36, 6 January 2021

Reaction 2.4.1.119-RXN

  • direction:
    • left-to-right
  • common-name:
    • dad/ost2
    • dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit swp1
    • oligosaccharyl transferase complex, subunit ost3/ost6
    • ribophorin i
    • dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit wbp1
    • dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a, c-terminal fragment, family gt66
    • dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a, n-terminal fragment, family gt66
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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