Difference between revisions of "3.4.21.102-RXN"

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(Created page with "Category:reaction == Reaction OXALODECARB-RXN == * direction: ** left-to-right * common-name: ** malate dehydrogenase (decarboxylating) (nad+) * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction RXN-14325 == * direction: ** left-to-right * common-name: ** ctp synthase == Reaction formula == * 1 AMMONIUM[c] '''+''' 1 ATP[c] '''...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction OXALODECARB-RXN ==
+
== Reaction RXN-14325 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** malate dehydrogenase (decarboxylating) (nad+)
+
** ctp synthase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.1.1.38 ec-1.1.1.38]
 
−
** [http://enzyme.expasy.org/EC/4.1.1.3 ec-4.1.1.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[UTP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CTP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-07_002070]]
+
* Gene: [[Ec-20_000910]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[Ec-01_003680]]
+
* Gene: [[Ec-00_000570]]
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-07_002060]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6339]], syringate degradation:
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation:
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway):
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15642 15642]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16598 16598]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00217 R00217]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P13187 P13187]
 
−
** [http://www.uniprot.org/uniprot/P13155 P13155]
 
−
** [http://www.uniprot.org/uniprot/P13156 P13156]
 
−
** [http://www.uniprot.org/uniprot/Q58628 Q58628]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=malate dehydrogenase (decarboxylating) (nad+)}}
+
{{#set: common-name=ctp synthase}}
−
{{#set: ec-number=ec-1.1.1.38|ec-4.1.1.3}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=3}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}

Revision as of 15:42, 13 January 2021

Reaction RXN-14325

  • direction:
    • left-to-right
  • common-name:
    • ctp synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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