Difference between revisions of "3-DEHYDROQUINATE-DEHYDRATASE-RXN"

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(Created page with "Category:reaction == Reaction 2OXOGLUTARATEDEH-RXN == * direction: ** left-to-right * common-name: ** 2-oxoglutarate dehydrogenase complex ** dihydrolipoamide dehydrogenas...")
(Created page with "Category:reaction == Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN == * direction: ** reversible * common-name: ** 3-dehydroquinate dehydratase * ec-number: ** [http://enzyme....")
 
(4 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2OXOGLUTARATEDEH-RXN ==
+
== Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 2-oxoglutarate dehydrogenase complex
+
** 3-dehydroquinate dehydratase
−
** dihydrolipoamide dehydrogenase
+
* ec-number:
−
** 2-oxoglutarate dehydrogenase e1 component
+
** [http://enzyme.expasy.org/EC/4.2.1.10 ec-4.2.1.10]
−
* synonymous:
 
−
** 2-oxoglutarate dehydrogenation
 
−
** α-ketoglutarate oxidative decarboxylation
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUC-COA]][c]
+
* 1 [[DEHYDROQUINATE]][c] '''<=>''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-21_002300]]
+
* Gene: [[Ec-07_000550]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[Ec-25_000020]]
+
* Gene: [[Ec-26_004120]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[Ec-27_004160]]
+
* Gene: [[Ec-14_005400]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[Ec-02_006010]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5690]], TCA cycle II (plants and fungi):
+
* [[QUINATEDEG-PWY]], quinate degradation I:
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7254]], TCA cycle VII (acetate-producers):
+
* [[PWY-6707]], gallate biosynthesis:
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[TCA]], TCA cycle I (prokaryotic):
+
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate:
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''6''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6416]], quinate degradation II:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR97449
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27787 27787]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21099 21099]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08549 R08549]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03084 R03084]
−
{{#set: direction=left-to-right}}
+
* UNIPROT:
−
{{#set: common-name=dihydrolipoamide dehydrogenase|2-oxoglutarate dehydrogenase complex|2-oxoglutarate dehydrogenase e1 component}}
+
** [http://www.uniprot.org/uniprot/P05195 P05195]
−
{{#set: synonymous=2-oxoglutarate dehydrogenation|&alpha;-ketoglutarate oxidative decarboxylation}}
+
** [http://www.uniprot.org/uniprot/P46380 P46380]
−
{{#set: nb gene associated=3}}
+
** [http://www.uniprot.org/uniprot/Q9CF39 Q9CF39]
−
{{#set: nb pathway associated=3}}
+
** [http://www.uniprot.org/uniprot/P07547 P07547]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P08566 P08566]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P43878 P43878]
 +
** [http://www.uniprot.org/uniprot/P05194 P05194]
 +
** [http://www.uniprot.org/uniprot/Q58849 Q58849]
 +
** [http://www.uniprot.org/uniprot/P0A4Z6 P0A4Z6]
 +
** [http://www.uniprot.org/uniprot/Q9PJ53 Q9PJ53]
 +
** [http://www.uniprot.org/uniprot/P05147 P05147]
 +
** [http://www.uniprot.org/uniprot/P24670 P24670]
 +
** [http://www.uniprot.org/uniprot/P35146 P35146]
 +
** [http://www.uniprot.org/uniprot/Q42947 Q42947]
 +
** [http://www.uniprot.org/uniprot/Q48255 Q48255]
 +
** [http://www.uniprot.org/uniprot/P73367 P73367]
 +
** [http://www.uniprot.org/uniprot/O65917 O65917]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=3-dehydroquinate dehydratase}}
 +
{{#set: ec-number=ec-4.2.1.10}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}

Latest revision as of 09:05, 18 March 2021

Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN

  • direction:
    • reversible
  • common-name:
    • 3-dehydroquinate dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • QUINATEDEG-PWY, quinate degradation I:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6707, gallate biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate:
    • 6 reactions found over 5 reactions in the full pathway
  • PWY-6416, quinate degradation II:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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