Difference between revisions of "H2NEOPTERINALDOL-RXN"

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(Created page with "Category:reaction == Reaction RXN-14048 == * direction: ** left-to-right * common-name: ** pyridoxal phosphate-dependent transferase, major region, subdomain 1 == Reaction...")
(Created page with "Category:reaction == Reaction H2NEOPTERINALDOL-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2.25 ec-4.1.2.25] == Reaction formula ==...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14048 ==
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== Reaction H2NEOPTERINALDOL-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
+
* ec-number:
−
** pyridoxal phosphate-dependent transferase, major region, subdomain 1
+
** [http://enzyme.expasy.org/EC/4.1.2.25 ec-4.1.2.25]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-CYSTATHIONINE]][c] '''=>''' 1 [[CPD-15056]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[DIHYDRO-NEO-PTERIN]][c] '''<=>''' 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''+''' 1 [[GLYCOLALDEHYDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-12_003100]]
 
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** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine):
+
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I:
−
** '''4''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-801]], homocysteine and cysteine interconversion:
+
* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus):
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6148]], tetrahydromethanopterin biosynthesis:
 +
** '''2''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR112152
+
* METANETX-RXN : MNXR125603
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10541 10541]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08632 R08632]
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** [http://www.genome.jp/dbget-bin/www_bget?R03504 R03504]
−
* RHEA:
+
* UNIPROT:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24913 24913]
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** [http://www.uniprot.org/uniprot/P22291 P22291]
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{{#set: direction=left-to-right}}
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** [http://www.uniprot.org/uniprot/Q9CGE4 Q9CGE4]
−
{{#set: common-name=pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
+
** [http://www.uniprot.org/uniprot/Q9JUL3 Q9JUL3]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P28823 P28823]
−
{{#set: nb pathway associated=2}}
+
** [http://www.uniprot.org/uniprot/P29251 P29251]
−
{{#set: reconstruction category=annotation}}
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** [http://www.uniprot.org/uniprot/P53848 P53848]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/O75013 O75013]
−
{{#set: reconstruction comment=n.a}}
+
{{#set: direction=reversible}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: ec-number=ec-4.1.2.25}}
 +
{{#set: nb gene associated=0}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=gap-filling}}
 +
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}
 +
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Latest revision as of 09:04, 18 March 2021

Reaction H2NEOPTERINALDOL-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6147, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6797, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7539, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6148, tetrahydromethanopterin biosynthesis:
    • 2 reactions found over 14 reactions in the full pathway

Reconstruction information

External links





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