Difference between revisions of "ExchangeSeed CPD-315"

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(Created page with "Category:reaction == Reaction PYRIMSYN3-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.7 ec-2.7.4.7] == Reaction formula == * 1 ...")
 
(Created page with "Category:reaction == Reaction RXN-13416 == * direction: ** left-to-right * common-name: ** deoxyhypusine synthase == Reaction formula == * 1 EIF5A-LYSINE[c] '''+''' 1...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PYRIMSYN3-RXN ==
+
== Reaction RXN-13416 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec-number:
+
* common-name:
−
** [http://enzyme.expasy.org/EC/2.7.4.7 ec-2.7.4.7]
+
** deoxyhypusine synthase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMINO-HYDROXYMETHYL-METHYL-PYR-P]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c]
+
* 1 [[EIF5A-LYSINE]][c] '''+''' 1 [[N-4-aminobutylidene-enzyme-lysine]][c] '''=>''' 1 [[Deoxyhypusine-Synthase-Lysine]][c] '''+''' 1 [[N-4-aminobutylidene-eIF5A-lysine]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-06_006870]]
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* Gene: [[Ec-27_002000]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6890]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis:
+
* [[PWY-5905]], hypusine biosynthesis:
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast):
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7282]], 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis:
 
−
** '''5''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7356]], thiamine salvage IV (yeast):
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6910]], hydroxymethylpyrimidine salvage:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19894 19894]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04509 R04509]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JTE1 Q9JTE1]
 
−
** [http://www.uniprot.org/uniprot/Q9PNL2 Q9PNL2]
 
−
** [http://www.uniprot.org/uniprot/Q9CI79 Q9CI79]
 
−
** [http://www.uniprot.org/uniprot/Q9CG47 Q9CG47]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.7.4.7}}
+
{{#set: common-name=deoxyhypusine synthase}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 16:28, 6 January 2021

Reaction RXN-13416

  • direction:
    • left-to-right
  • common-name:
    • deoxyhypusine synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5905, hypusine biosynthesis:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//esilgem/index.php?title=ExchangeSeed_CPD-315&oldid=13153"