Difference between revisions of "ExchangeSeed SULFATE"

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(Created page with "Category:reaction == Reaction PMPOXI-RXN == * direction: ** left-to-right * common-name: ** pyridoxamine-phosphate oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.4...")
 
(Created page with "Category:reaction == Reaction ACYLCOADEHYDROG-RXN == * direction: ** left-to-right * common-name: ** acyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PMPOXI-RXN ==
+
== Reaction ACYLCOADEHYDROG-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** pyridoxamine-phosphate oxidase
+
** acyl-coa dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.3.5 ec-1.4.3.5]
+
** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8]
 +
* synonymous:
 +
** long-chain acyl-coa dehydrogenase
 +
** general acyl coa dehydrogenase
 +
** acyl coenzyme a dehydrogenase
 +
** long-chain acyl coenzyme a dehydrogenase
 +
** medium-chain acyl-coenzyme a dehydrogenase
 +
** fatty-acyl-coa dehydrogenase
 +
** fatty acyl coenzyme a dehydrogenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PYRIDOXAMINE-5P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c]
+
* 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-09_002030]]
+
* Gene: [[Ec-06_008910]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[Ec-01_000340]]
+
* Gene: [[Ec-14_001600]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[Ec-10_006030]]
+
* Gene: [[Ec-08_006390]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-21_001100]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-16_004260]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-03_003490]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I:
+
* [[FAO-PWY]], fatty acid β-oxidation I (generic):
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants):
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15818 15818]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44705 44705]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00277 R00277]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P0AFI7 P0AFI7]
+
** [http://www.uniprot.org/uniprot/P16219 P16219]
−
** [http://www.uniprot.org/uniprot/Q9JTZ1 Q9JTZ1]
+
** [http://www.uniprot.org/uniprot/P45952 P45952]
−
** [http://www.uniprot.org/uniprot/P44909 P44909]
+
** [http://www.uniprot.org/uniprot/P15651 P15651]
−
** [http://www.uniprot.org/uniprot/P38075 P38075]
+
** [http://www.uniprot.org/uniprot/P11310 P11310]
−
** [http://www.uniprot.org/uniprot/P74211 P74211]
+
** [http://www.uniprot.org/uniprot/P08503 P08503]
 +
** [http://www.uniprot.org/uniprot/Q07417 Q07417]
 +
** [http://www.uniprot.org/uniprot/Q54857 Q54857]
 +
** [http://www.uniprot.org/uniprot/P45867 P45867]
 +
** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
 +
** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
 +
** [http://www.uniprot.org/uniprot/Q96329 Q96329]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=pyridoxamine-phosphate oxidase}}
+
{{#set: common-name=acyl-coa dehydrogenase}}
−
{{#set: ec-number=ec-1.4.3.5}}
+
{{#set: ec-number=ec-1.3.8}}
−
{{#set: nb gene associated=3}}
+
{{#set: synonymous=acyl coenzyme a dehydrogenase|long-chain acyl coenzyme a dehydrogenase|medium-chain acyl-coenzyme a dehydrogenase|general acyl coa dehydrogenase|fatty acyl coenzyme a dehydrogenase|long-chain acyl-coa dehydrogenase|fatty-acyl-coa dehydrogenase}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb gene associated=6}}
 +
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 16:31, 6 January 2021

Reaction ACYLCOADEHYDROG-RXN

  • direction:
    • left-to-right
  • common-name:
    • acyl-coa dehydrogenase
  • ec-number:
  • synonymous:
    • long-chain acyl-coa dehydrogenase
    • general acyl coa dehydrogenase
    • acyl coenzyme a dehydrogenase
    • long-chain acyl coenzyme a dehydrogenase
    • medium-chain acyl-coenzyme a dehydrogenase
    • fatty-acyl-coa dehydrogenase
    • fatty acyl coenzyme a dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • FAO-PWY, fatty acid β-oxidation I (generic):
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






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