Difference between revisions of "R07861"

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(Created page with "Category:reaction == Reaction HYDROG-RXN == * direction: ** reversible * common-name: ** ferredoxin hydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.12.7.2 ec-1....")
 
(Created page with "Category:reaction == Reaction RXN66-470 == * direction: ** left-to-right * common-name: ** 3-methyl-branched fatty acyl-coa 2-hydroxylase ** phytanoyl-coa dioxygenase * ec...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HYDROG-RXN ==
+
== Reaction RXN66-470 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** ferredoxin hydrogenase
+
** 3-methyl-branched fatty acyl-coa 2-hydroxylase
 +
** phytanoyl-coa dioxygenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.12.7.2 ec-1.12.7.2]
+
** [http://enzyme.expasy.org/EC/1.14.11 ec-1.14.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HYDROGEN-MOLECULE]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''<=>''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[2-OH-3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-24_003110]]
+
* Gene: [[Ec-22_003660]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[Ec-22_001020]]
+
* Gene: [[Ec-01_011990]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-01_001740]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-23_003040]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUDEG-II-PWY]], L-glutamate degradation VII (to butanoate):
+
* [[PWY66-387]], &beta;-methyl-branched fatty acid &alpha;-oxidation:
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6780]], hydrogen production VI:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6759]], hydrogen production III:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6785]], hydrogen production VIII:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii):
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=left-to-right}}
−
* RHEA:
+
{{#set: common-name=3-methyl-branched fatty acyl-coa 2-hydroxylase|phytanoyl-coa dioxygenase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17448 17448]
+
{{#set: ec-number=ec-1.14.11}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=4}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00019 R00019]
+
{{#set: nb pathway associated=1}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P27648 P27648]
 
−
** [http://www.uniprot.org/uniprot/P31892 P31892]
 
−
** [http://www.uniprot.org/uniprot/O25350 O25350]
 
−
** [http://www.uniprot.org/uniprot/O67092 O67092]
 
−
** [http://www.uniprot.org/uniprot/P31891 P31891]
 
−
** [http://www.uniprot.org/uniprot/P0AAJ8 P0AAJ8]
 
−
** [http://www.uniprot.org/uniprot/O66894 O66894]
 
−
** [http://www.uniprot.org/uniprot/P0AAM1 P0AAM1]
 
−
** [http://www.uniprot.org/uniprot/P31898 P31898]
 
−
** [http://www.uniprot.org/uniprot/P0ACE0 P0ACE0]
 
−
** [http://www.uniprot.org/uniprot/O28891 O28891]
 
−
** [http://www.uniprot.org/uniprot/O66895 O66895]
 
−
** [http://www.uniprot.org/uniprot/Q9ZLK4 Q9ZLK4]
 
−
** [http://www.uniprot.org/uniprot/Q9WY44 Q9WY44]
 
−
** [http://www.uniprot.org/uniprot/Q46508 Q46508]
 
−
** [http://www.uniprot.org/uniprot/O66896 O66896]
 
−
** [http://www.uniprot.org/uniprot/O67095 O67095]
 
−
** [http://www.uniprot.org/uniprot/Q9PN32 Q9PN32]
 
−
** [http://www.uniprot.org/uniprot/P13061 P13061]
 
−
** [http://www.uniprot.org/uniprot/Q9UYN3 Q9UYN3]
 
−
** [http://www.uniprot.org/uniprot/P16429 P16429]
 
−
** [http://www.uniprot.org/uniprot/O52683 O52683]
 
−
** [http://www.uniprot.org/uniprot/P13066 P13066]
 
−
** [http://www.uniprot.org/uniprot/O25349 O25349]
 
−
** [http://www.uniprot.org/uniprot/P0AAK1 P0AAK1]
 
−
** [http://www.uniprot.org/uniprot/P29166 P29166]
 
−
** [http://www.uniprot.org/uniprot/P07603 P07603]
 
−
** [http://www.uniprot.org/uniprot/P13628 P13628]
 
−
** [http://www.uniprot.org/uniprot/P0ACD8 P0ACD8]
 
−
** [http://www.uniprot.org/uniprot/P69739 P69739]
 
−
** [http://www.uniprot.org/uniprot/P12636 P12636]
 
−
** [http://www.uniprot.org/uniprot/P12635 P12635]
 
−
** [http://www.uniprot.org/uniprot/Q59262 Q59262]
 
−
** [http://www.uniprot.org/uniprot/P33375 P33375]
 
−
** [http://www.uniprot.org/uniprot/P33374 P33374]
 
−
** [http://www.uniprot.org/uniprot/P21950 P21950]
 
−
** [http://www.uniprot.org/uniprot/P21949 P21949]
 
−
** [http://www.uniprot.org/uniprot/P23000 P23000]
 
−
** [http://www.uniprot.org/uniprot/Q7M121 Q7M121]
 
−
** [http://www.uniprot.org/uniprot/P15283 P15283]
 
−
** [http://www.uniprot.org/uniprot/P15284 P15284]
 
−
** [http://www.uniprot.org/uniprot/P16430 P16430]
 
−
** [http://www.uniprot.org/uniprot/P16431 P16431]
 
−
** [http://www.uniprot.org/uniprot/P16432 P16432]
 
−
** [http://www.uniprot.org/uniprot/P16433 P16433]
 
−
** [http://www.uniprot.org/uniprot/P17633 P17633]
 
−
** [http://www.uniprot.org/uniprot/P17632 P17632]
 
−
** [http://www.uniprot.org/uniprot/P18191 P18191]
 
−
** [http://www.uniprot.org/uniprot/P18637 P18637]
 
−
** [http://www.uniprot.org/uniprot/P18636 P18636]
 
−
** [http://www.uniprot.org/uniprot/Q46606 Q46606]
 
−
** [http://www.uniprot.org/uniprot/P31875 P31875]
 
−
** [http://www.uniprot.org/uniprot/Q7M0Y1 Q7M0Y1]
 
−
** [http://www.uniprot.org/uniprot/Q7M0Y0 Q7M0Y0]
 
−
** [http://www.uniprot.org/uniprot/Q9S8S0 Q9S8S0]
 
−
** [http://www.uniprot.org/uniprot/P31883 P31883]
 
−
** [http://www.uniprot.org/uniprot/P21960 P21960]
 
−
** [http://www.uniprot.org/uniprot/Q43953 Q43953]
 
−
** [http://www.uniprot.org/uniprot/O96948 O96948]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=ferredoxin hydrogenase}}
 
−
{{#set: ec-number=ec-1.12.7.2}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=5}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 16:31, 6 January 2021

Reaction RXN66-470

  • direction:
    • left-to-right
  • common-name:
    • 3-methyl-branched fatty acyl-coa 2-hydroxylase
    • phytanoyl-coa dioxygenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-387, β-methyl-branched fatty acid α-oxidation:
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//esilgem/index.php?title=R07861&oldid=13891"