Difference between revisions of "RXN-13431"
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(Created page with "Category:reaction == Reaction RXN-15815 == * direction: ** left-to-right == Reaction formula == * 1 Cytochromes-C-Oxidized[e] '''+''' 1 E-[c] '''=>''' 1 Cytochro...") |
(Created page with "Category:reaction == Reaction SERINE-C-PALMITOYLTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** aminotransferase, class i/classii * ec-number: ** [http:...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction SERINE-C-PALMITOYLTRANSFERASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * common-name: | ||
| + | ** aminotransferase, class i/classii | ||
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.3.1.50 ec-2.3.1.50] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[PALMITYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[DEHYDROSPHINGANINE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| + | * Gene: [[Ec-24_002690]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[Ec-11_004190]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY3DJ-12]], ceramide de novo biosynthesis: | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-5129]], sphingolipid biosynthesis (plants): | ||
| + | ** '''1''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): | ||
| + | ** '''1''' reactions found over '''11''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14762 14762] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01281 R01281] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P25045 P25045] | ||
| + | ** [http://www.uniprot.org/uniprot/O15270 O15270] | ||
| + | ** [http://www.uniprot.org/uniprot/P48241 P48241] | ||
| + | ** [http://www.uniprot.org/uniprot/Q09925 Q09925] | ||
| + | ** [http://www.uniprot.org/uniprot/P40970 P40970] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9XVI6 Q9XVI6] | ||
| + | ** [http://www.uniprot.org/uniprot/Q20375 Q20375] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9M304 Q9M304] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: nb gene associated= | + | {{#set: common-name=aminotransferase, class i/classii}} |
| − | {{#set: nb pathway associated= | + | {{#set: ec-number=ec-2.3.1.50}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: nb gene associated=2}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: nb pathway associated=3}} |
| + | {{#set: reconstruction category=annotation|orthology}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=esiliculosus_genome}} | + | {{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}} |
Revision as of 16:36, 6 January 2021
Contents
Reaction SERINE-C-PALMITOYLTRANSFERASE-RXN
- direction:
- left-to-right
- common-name:
- aminotransferase, class i/classii
- ec-number:
Reaction formula
- 1 PALMITYL-COA[c] + 1 PROTON[c] + 1 SER[c] => 1 CARBON-DIOXIDE[c] + 1 CO-A[c] + 1 DEHYDROSPHINGANINE[c]
Gene(s) associated with this reaction
- Gene: Ec-24_002690
- Category: annotation
- Source: esiliculosus_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: Ec-11_004190
- Category: annotation
- Source: esiliculosus_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY3DJ-12, ceramide de novo biosynthesis:
- 1 reactions found over 4 reactions in the full pathway
- PWY-5129, sphingolipid biosynthesis (plants):
- 1 reactions found over 13 reactions in the full pathway
- SPHINGOLIPID-SYN-PWY, sphingolipid biosynthesis (yeast):
- 1 reactions found over 11 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_aragem; tool: pantograph; comment: n.a
- category: annotation; source: esiliculosus_genome; tool: pathwaytools; comment: n.a
External links
