Difference between revisions of "RXN-14146"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 2.1.1.17-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.17 ec-2.1.1.17] == Reaction formula == * 1 [...")
 
(Created page with "Category:reaction == Reaction TREHALOSEPHOSPHA-RXN == * direction: ** left-to-right * common-name: ** trehalose 6-phosphate synthase, family gt20 / trehalose 6-phosphate p...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.1.1.17-RXN ==
+
== Reaction TREHALOSEPHOSPHA-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** trehalose 6-phosphate synthase, family gt20 / trehalose 6-phosphate phosphatase
 +
** had-like domain
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.17 ec-2.1.1.17]
+
** [http://enzyme.expasy.org/EC/3.1.3.12 ec-3.1.3.12]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-1-PHOSPHATIDYL-ETHANOLAMINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-405]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[TREHALOSE-6P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[TREHALOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[Ec-22_003320]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-06_003140]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-11_002540]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-08_005270]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-05_002680]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-19_005250]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-24_004390]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[Ec-20_003980]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6825]], phosphatidylcholine biosynthesis V:
+
* [[TREHALOSESYN-PWY]], trehalose biosynthesis III:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-881]], trehalose biosynthesis II:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[TRESYN-PWY]], trehalose biosynthesis I:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02778 R02778]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11165 11165]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23420 23420]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02056 R02056]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P05374 P05374]
+
** [http://www.uniprot.org/uniprot/P31678 P31678]
−
** [http://www.uniprot.org/uniprot/Q05197 Q05197]
+
** [http://www.uniprot.org/uniprot/P31688 P31688]
−
** [http://www.uniprot.org/uniprot/Q08388 Q08388]
+
** [http://www.uniprot.org/uniprot/Q00786 Q00786]
 +
** [http://www.uniprot.org/uniprot/P78875 P78875]
 +
** [http://www.uniprot.org/uniprot/O64896 O64896]
 +
** [http://www.uniprot.org/uniprot/O64897 O64897]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.1.1.17}}
+
{{#set: common-name=had-like domain|trehalose 6-phosphate synthase, family gt20 / trehalose 6-phosphate phosphatase}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-3.1.3.12}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=8}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}

Revision as of 16:36, 6 January 2021

Reaction TREHALOSEPHOSPHA-RXN

  • direction:
    • left-to-right
  • common-name:
    • trehalose 6-phosphate synthase, family gt20 / trehalose 6-phosphate phosphatase
    • had-like domain
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TREHALOSESYN-PWY, trehalose biosynthesis III:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-881, trehalose biosynthesis II:
    • 2 reactions found over 2 reactions in the full pathway
  • TRESYN-PWY, trehalose biosynthesis I:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esilgem/index.php?title=RXN-14146&oldid=14941"