Difference between revisions of "METHIONYL-TRNA-FORMYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction 2OXOGLUTARATEDEH-RXN == * direction: ** left-to-right * common-name: ** 2-oxoglutarate dehydrogenase complex ** dihydrolipoamide dehydrogenas...")
 
(Created page with "Category:reaction == Reaction RXN-12587 == * direction: ** reversible * common-name: ** aminotransferase class v domain ** cysteine desulfurase * ec-number: ** [http://enz...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2OXOGLUTARATEDEH-RXN ==
+
== Reaction RXN-12587 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 2-oxoglutarate dehydrogenase complex
+
** aminotransferase class v domain
−
** dihydrolipoamide dehydrogenase
+
** cysteine desulfurase
−
** 2-oxoglutarate dehydrogenase e1 component
+
* ec-number:
−
* synonymous:
+
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
−
** 2-oxoglutarate dehydrogenation
 
−
** α-ketoglutarate oxidative decarboxylation
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUC-COA]][c]
+
* 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''<=>''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-21_002300]]
+
* Gene: [[Ec-21_005640]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-25_000020]]
+
* Gene: [[Ec-21_003740]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-27_004160]]
+
* Gene: [[Ec-22_000950]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5690]], TCA cycle II (plants and fungi):
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7254]], TCA cycle VII (acetate-producers):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[TCA]], TCA cycle I (prokaryotic):
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R11529 R11529]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27787 27787]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43891 43891]
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R08549 R08549]
+
{{#set: common-name=aminotransferase class v domain|cysteine desulfurase}}
−
{{#set: direction=left-to-right}}
+
{{#set: ec-number=ec-2.8.1.7}}
−
{{#set: common-name=dihydrolipoamide dehydrogenase|2-oxoglutarate dehydrogenase complex|2-oxoglutarate dehydrogenase e1 component}}
 
−
{{#set: synonymous=2-oxoglutarate dehydrogenation|&alpha;-ketoglutarate oxidative decarboxylation}}
 
 
{{#set: nb gene associated=3}}
 
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 16:36, 6 January 2021

Reaction RXN-12587

  • direction:
    • reversible
  • common-name:
    • aminotransferase class v domain
    • cysteine desulfurase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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