Difference between revisions of "RXN-7967"

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(Created page with "Category:reaction == Reaction GLUTAMATE-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** glutamate dehydrogenase (nad-dependent) * ec-number: ** [http://e...")
 
(Created page with "Category:reaction == Reaction GALACTONOLACTONASE-RXN == * direction: ** left-to-right * common-name: ** d-galactono-1,4-lactonase ** lactonase domain-containing protein *...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTAMATE-DEHYDROGENASE-RXN ==
+
== Reaction GALACTONOLACTONASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamate dehydrogenase (nad-dependent)
+
** d-galactono-1,4-lactonase
 +
** lactonase domain-containing protein
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.1.2 ec-1.4.1.2]
+
** [http://enzyme.expasy.org/EC/3.1.1.25 ec-3.1.1.25]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[D-GALACTONO-1-4-LACTONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-GALACTONATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-12_008040]]
+
* Gene: [[Ec-10_002500]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[Ec-06_008240]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[Ec-06_001980]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-21_001990]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate):
+
* [[GALDEG-PWY]], D-galactose degradation II:
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[GLUTAMATE-DEG1-PWY]], L-glutamate degradation I:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5022]], 4-aminobutanoate degradation V:
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
 
−
** '''4''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6728]], methylaspartate cycle:
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-7126]], ethylene biosynthesis IV (engineered):
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15136 15136]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44901 44901]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00243 R00243]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03034 R03034]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P20016 P20016]
+
{{#set: common-name=d-galactono-1,4-lactonase|lactonase domain-containing protein}}
−
** [http://www.uniprot.org/uniprot/P28997 P28997]
+
{{#set: ec-number=ec-3.1.1.25}}
−
** [http://www.uniprot.org/uniprot/P41755 P41755]
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/Q9JTP6 Q9JTP6]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P00365 P00365]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P93541 P93541]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P80319 P80319]
 
−
** [http://www.uniprot.org/uniprot/P24295 P24295]
 
−
** [http://www.uniprot.org/uniprot/P27346 P27346]
 
−
** [http://www.uniprot.org/uniprot/P33327 P33327]
 
−
** [http://www.uniprot.org/uniprot/Q43260 Q43260]
 
−
** [http://www.uniprot.org/uniprot/O04937 O04937]
 
−
** [http://www.uniprot.org/uniprot/Q25415 Q25415]
 
−
** [http://www.uniprot.org/uniprot/O74024 O74024]
 
−
** [http://www.uniprot.org/uniprot/O59650 O59650]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=glutamate dehydrogenase (nad-dependent)}}
 
−
{{#set: ec-number=ec-1.4.1.2}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=6}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 16:36, 6 January 2021

Reaction GALACTONOLACTONASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • d-galactono-1,4-lactonase
    • lactonase domain-containing protein
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GALDEG-PWY, D-galactose degradation II:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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