Difference between revisions of "RXN-15733"

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(Created page with "Category:reaction == Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN == * direction: ** reversible * common-name: ** 3-dehydroquinate dehydratase * ec-number: ** [http://enzyme....")
 
(Created page with "Category:reaction == Reaction TransportSeed_CARBON-DIOXIDE == * direction: ** left-to-right == Reaction formula == * 1.0 CARBON-DIOXIDE[e] '''=>''' 1.0 CARBON-DIOXID...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN ==
+
== Reaction TransportSeed_CARBON-DIOXIDE ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** 3-dehydroquinate dehydratase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/4.2.1.10 ec-4.2.1.10]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DEHYDROQUINATE]][c] '''<=>''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[WATER]][c]
+
* 1.0 [[CARBON-DIOXIDE]][e] '''=>''' 1.0 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-07_000550]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-26_004120]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[Ec-14_005400]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[Ec-02_006010]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[QUINATEDEG-PWY]], quinate degradation I:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6707]], gallate biosynthesis:
 
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** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate:
 
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** '''6''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6416]], quinate degradation II:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
−
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=left-to-right}}
−
* RHEA:
+
{{#set: nb gene associated=0}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21099 21099]
+
{{#set: nb pathway associated=0}}
−
* LIGAND-RXN:
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{{#set: reconstruction category=manual}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03084 R03084]
+
{{#set: reconstruction tool=curation}}
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* UNIPROT:
+
{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
−
** [http://www.uniprot.org/uniprot/P05195 P05195]
+
{{#set: reconstruction source=import_from_medium}}
−
** [http://www.uniprot.org/uniprot/P46380 P46380]
 
−
** [http://www.uniprot.org/uniprot/Q9CF39 Q9CF39]
 
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
 
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
 
−
** [http://www.uniprot.org/uniprot/P43878 P43878]
 
−
** [http://www.uniprot.org/uniprot/P05194 P05194]
 
−
** [http://www.uniprot.org/uniprot/Q58849 Q58849]
 
−
** [http://www.uniprot.org/uniprot/P0A4Z6 P0A4Z6]
 
−
** [http://www.uniprot.org/uniprot/Q9PJ53 Q9PJ53]
 
−
** [http://www.uniprot.org/uniprot/P05147 P05147]
 
−
** [http://www.uniprot.org/uniprot/P24670 P24670]
 
−
** [http://www.uniprot.org/uniprot/P35146 P35146]
 
−
** [http://www.uniprot.org/uniprot/Q42947 Q42947]
 
−
** [http://www.uniprot.org/uniprot/Q48255 Q48255]
 
−
** [http://www.uniprot.org/uniprot/P73367 P73367]
 
−
** [http://www.uniprot.org/uniprot/O65917 O65917]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=3-dehydroquinate dehydratase}}
 
−
{{#set: ec-number=ec-4.2.1.10}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
 

Revision as of 16:36, 6 January 2021

Reaction TransportSeed_CARBON-DIOXIDE

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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