Difference between revisions of "RXN1G-368"

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(Created page with "Category:reaction == Reaction METHYLVALERATE-RXN == * direction: ** reversible * common-name: ** 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)...")
 
(Created page with "Category:reaction == Reaction ARGSUCCINSYN-RXN == * direction: ** left-to-right * common-name: ** argininosuccinate synthetase * ec-number: ** [http://enzyme.expasy.org/EC...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction METHYLVALERATE-RXN ==
+
== Reaction ARGSUCCINSYN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)
+
** argininosuccinate synthetase
−
** dehydrogenase, e1 component
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4]
+
** [http://enzyme.expasy.org/EC/6.3.4.5 ec-6.3.4.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BCAA-dehydrogenase-2MB-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[L-CITRULLINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-ARGININO-SUCCINATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-10_006360]]
+
* Gene: [[Ec-01_001870]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
 +
** '''5''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-4984]], urea cycle:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline):
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4983]], nitric oxide biosynthesis II (mammals):
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria):
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10932 10932]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01954 R01954]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P21839 P21839]
+
** [http://www.uniprot.org/uniprot/P22768 P22768]
−
** [http://www.uniprot.org/uniprot/P21953 P21953]
+
** [http://www.uniprot.org/uniprot/P0A6E4 P0A6E4]
−
** [http://www.uniprot.org/uniprot/P37940 P37940]
+
** [http://www.uniprot.org/uniprot/P00966 P00966]
−
** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
+
** [http://www.uniprot.org/uniprot/P16460 P16460]
−
** [http://www.uniprot.org/uniprot/P37941 P37941]
+
** [http://www.uniprot.org/uniprot/P13256 P13256]
−
** [http://www.uniprot.org/uniprot/P11178 P11178]
+
** [http://www.uniprot.org/uniprot/P13257 P13257]
−
** [http://www.uniprot.org/uniprot/P12694 P12694]
+
** [http://www.uniprot.org/uniprot/P09034 P09034]
−
** [http://www.uniprot.org/uniprot/P09061 P09061]
+
** [http://www.uniprot.org/uniprot/P24532 P24532]
−
** [http://www.uniprot.org/uniprot/P09060 P09060]
+
** [http://www.uniprot.org/uniprot/Q9PHK7 Q9PHK7]
−
** [http://www.uniprot.org/uniprot/P11960 P11960]
+
** [http://www.uniprot.org/uniprot/P57799 P57799]
−
** [http://www.uniprot.org/uniprot/O84344 O84344]
+
** [http://www.uniprot.org/uniprot/Q60174 Q60174]
−
** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
+
** [http://www.uniprot.org/uniprot/P44315 P44315]
−
** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
+
** [http://www.uniprot.org/uniprot/Q9JWM1 Q9JWM1]
−
** [http://www.uniprot.org/uniprot/P35738 P35738]
+
** [http://www.uniprot.org/uniprot/P50986 P50986]
−
** [http://www.uniprot.org/uniprot/P50136 P50136]
+
** [http://www.uniprot.org/uniprot/Q06734 Q06734]
−
** [http://www.uniprot.org/uniprot/O48615 O48615]
+
** [http://www.uniprot.org/uniprot/P0C1A1 P0C1A1]
−
** [http://www.uniprot.org/uniprot/O03849 O03849]
+
** [http://www.uniprot.org/uniprot/Q59491 Q59491]
−
** [http://www.uniprot.org/uniprot/Q53592 Q53592]
 
−
** [http://www.uniprot.org/uniprot/Q53593 Q53593]
 
−
** [http://www.uniprot.org/uniprot/O82450 O82450]
 
 
</div>
 
</div>
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)|dehydrogenase, e1 component}}
+
{{#set: common-name=argininosuccinate synthetase}}
−
{{#set: ec-number=ec-1.2.4.4}}
+
{{#set: ec-number=ec-6.3.4.5}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=6}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}

Revision as of 16:36, 6 January 2021

Reaction ARGSUCCINSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • argininosuccinate synthetase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ARGSYN-PWY, L-arginine biosynthesis I (via L-ornithine):
    • 5 reactions found over 4 reactions in the full pathway
  • PWY-4984, urea cycle:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline):
    • 7 reactions found over 9 reactions in the full pathway
  • ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle):
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-4983, nitric oxide biosynthesis II (mammals):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7400, L-arginine biosynthesis IV (archaebacteria):
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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