Difference between revisions of "ExchangeSeed FE+2"
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(Created page with "Category:reaction == Reaction DAPASYN-RXN == * direction: ** reversible * common-name: ** bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase...") |
(Created page with "Category:reaction == Reaction RXN-14903 == * direction: ** left-to-right * common-name: ** proline dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.5.5.2 ec-1....") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction RXN-14903 == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** proline dehydrogenase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.5.5.2 ec-1.5.5.2] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ETR-Quinones]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[Ec- | + | * Gene: [[Ec-18_001350]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[PWY-5737]], (5R)-carbapenem carboxylate biosynthesis: |
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PROUT-PWY]], L-proline degradation: | ||
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[CITRULBIO-PWY]], L-citrulline biosynthesis: | ||
+ | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | |||
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23785 23785] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P95629 P95629] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59206 Q59206] | ||
+ | ** [http://www.uniprot.org/uniprot/P74275 P74275] | ||
+ | ** [http://www.uniprot.org/uniprot/P10503 P10503] | ||
+ | ** [http://www.uniprot.org/uniprot/Q51873 Q51873] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59426 Q59426] | ||
+ | ** [http://www.uniprot.org/uniprot/O24897 O24897] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9K0Z9 Q9K0Z9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JSY1 Q9JSY1] | ||
+ | ** [http://www.uniprot.org/uniprot/P09546 P09546] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PMG0 Q9PMG0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZN12 Q9ZN12] | ||
+ | ** [http://www.uniprot.org/uniprot/Q04499 Q04499] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01253 R01253] |
− | + | {{#set: direction=left-to-right}} | |
− | + | {{#set: common-name=proline dehydrogenase}} | |
− | + | {{#set: ec-number=ec-1.5.5.2}} | |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | {{#set: direction= | ||
− | {{#set: common-name= | ||
− | {{#set: ec-number=ec- | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
− | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=annotation}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=esiliculosus_genome | + | {{#set: reconstruction source=esiliculosus_genome}} |
Revision as of 12:17, 12 January 2021
Contents
Reaction RXN-14903
- direction:
- left-to-right
- common-name:
- proline dehydrogenase
- ec-number:
Reaction formula
- 1 ETR-Quinones[c] + 1 PRO[c] => 1 ETR-Quinols[c] + 1 L-DELTA1-PYRROLINE_5-CARBOXYLATE[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: Ec-18_001350
- Category: annotation
- Source: esiliculosus_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5737, (5R)-carbapenem carboxylate biosynthesis:
- 1 reactions found over 6 reactions in the full pathway
- PROUT-PWY, L-proline degradation:
- 3 reactions found over 3 reactions in the full pathway
- PWY-6922, L-Nδ-acetylornithine biosynthesis:
- 6 reactions found over 7 reactions in the full pathway
- CITRULBIO-PWY, L-citrulline biosynthesis:
- 8 reactions found over 8 reactions in the full pathway
Reconstruction information
- category: annotation; source: esiliculosus_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN: