Difference between revisions of "RXN-12383"

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(Created page with "Category:reaction == Reaction 2.5.1.32-RXN == * direction: ** left-to-right * common-name: ** phytoene synthase; chloroplast precursor * synonymous: ** psase ** geranylger...")
(Created page with "Category:reaction == Reaction ExchangeSeed_MN+2 == * direction: ** reversible == Reaction formula == * 1.0 MN+2[C-BOUNDARY] '''<=>''' 1.0 MN+2[e] == Gene(s) associ...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction 2.5.1.32-RXN ==
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== Reaction ExchangeSeed_MN+2 ==
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
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** phytoene synthase; chloroplast precursor
 
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* synonymous:
 
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** psase
 
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** geranylgeranyl-diphosphate geranylgeranyltransferase
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 2 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-464]][c] '''+''' 1 [[PPI]][c]
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* 1.0 [[MN+2]][C-BOUNDARY] '''<=>''' 1.0 [[MN+2]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[Ec-04_002810]]
 
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** Category: [[annotation]]
 
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*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
 
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** '''4''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-6287]], neurosporene biosynthesis:
 
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22297 22297]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02065 R02065]
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{{#set: reconstruction category=manual}}
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* UNIPROT:
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{{#set: reconstruction tool=curation}}
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** [http://www.uniprot.org/uniprot/P53609 P53609]
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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** [http://www.uniprot.org/uniprot/P37295 P37295]
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{{#set: reconstruction source=import_from_medium}}
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** [http://www.uniprot.org/uniprot/P22872 P22872]
 
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** [http://www.uniprot.org/uniprot/P53610 P53610]
 
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** [http://www.uniprot.org/uniprot/P53612 P53612]
 
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** [http://www.uniprot.org/uniprot/P17056 P17056]
 
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** [http://www.uniprot.org/uniprot/P49293 P49293]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=phytoene synthase; chloroplast precursor}}
 
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{{#set: synonymous=psase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 12:20, 12 January 2021

Reaction ExchangeSeed_MN+2

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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