Difference between revisions of "RXN-21830"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction 1.8.5.1-RXN == * direction: ** left-to-right * common-name: ** thioredoxin-like fold * ec-number: ** [http://enzyme.expasy.org/EC/1.8.5.1 ec-...") |
(Created page with "Category:reaction == Reaction RXN-9623 == * direction: ** left-to-right * common-name: ** long chain acyl-coa synthetase * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1...") |
||
| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-9623 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** long chain acyl-coa synthetase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3] |
== Reaction formula == | == Reaction formula == | ||
| − | * | + | * 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PALMITATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PALMITYL-COA]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[Ec- | + | * Gene: [[Ec-12_008720]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a |
| + | * Gene: [[Ec-01_001560]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[Ec-02_006430]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[Ec-03_003710]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-5972]], stearate biosynthesis I (animals): |
| − | ** ''' | + | ** '''2''' reactions found over '''6''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-5971]], palmitate biosynthesis II (bacteria and plant cytoplasm): |
| − | ** ''' | + | ** '''28''' reactions found over '''31''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30754 30754] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01280 R01280] |
| − | |||
| − | |||
| − | |||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=long chain acyl-coa synthetase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-6.2.1.3}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=4}} |
{{#set: nb pathway associated=2}} | {{#set: nb pathway associated=2}} | ||
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=esiliculosus_genome}} | + | {{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}} |
Revision as of 15:54, 12 January 2021
Contents
Reaction RXN-9623
- direction:
- left-to-right
- common-name:
- long chain acyl-coa synthetase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: Ec-12_008720
- Category: annotation
- Source: esiliculosus_genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
- Gene: Ec-01_001560
- Category: annotation
- Source: esiliculosus_genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: orthology
- Source: output_pantograph_aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: Ec-02_006430
- Category: annotation
- Source: esiliculosus_genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: orthology
- Source: output_pantograph_aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: Ec-03_003710
- Category: annotation
- Source: esiliculosus_genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5972, stearate biosynthesis I (animals):
- 2 reactions found over 6 reactions in the full pathway
- PWY-5971, palmitate biosynthesis II (bacteria and plant cytoplasm):
- 28 reactions found over 31 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_aragem; tool: pantograph; comment: n.a
- category: annotation; source: esiliculosus_genome; tool: pathwaytools; comment: n.a
External links
