Difference between revisions of "RXN-14195"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN0-308 == * direction: ** left-to-right * common-name: ** aminotransferase class v domain ** cysteine desulfurase * ec-number: ** [http://e...")
(Created page with "Category:reaction == Reaction 4.2.1.58-RXN == * direction: ** left-to-right * common-name: ** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase * ec-number: ** [http...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-308 ==
+
== Reaction 4.2.1.58-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** aminotransferase class v domain
+
** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase
−
** cysteine desulfurase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 +
* synonymous:
 +
** β-hydroxybutyryl acyl carrier protein (acp) dehydrase
 +
** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase
 +
** enoyl acyl carrier protein hydrase
 +
** β-hydroxybutyryl acyl carrier  protein dehydrase
 +
** crotonyl acyl carrier protein hydratase
 +
** β-hydroxybutyryl acyl carrier protein dehydrase
 +
** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)
 +
** crotonoyl-[acyl-carrier-protein] hydratase
 +
** 3-hydroxybutyryl acyl carrier protein dehydratase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CYS]][c] '''+''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[L-Cysteine-Desulfurase-persulfide]][c]
+
* 1 [[Beta-3-hydroxybutyryl-ACPs]][c] '''=>''' 1 [[Crotonyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-21_005640]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[Ec-22_000950]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[Ec-21_003740]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria):
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plant cytoplasm):
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''28''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY0-1021]], L-alanine biosynthesis III:
+
* [[PWY-5994]], palmitate biosynthesis (animals and fungi, cytoplasm):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''20''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY-6823]], molybdenum cofactor biosynthesis:
+
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria):
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17458 17458]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04428 R04428]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=aminotransferase class v domain|cysteine desulfurase}}
+
{{#set: common-name=(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase}}
−
{{#set: ec-number=ec-2.8.1.7}}
+
{{#set: ec-number=ec-2.3.1.86|ec-4.2.1.59|ec-2.3.1.85}}
−
{{#set: nb gene associated=3}}
+
{{#set: synonymous=(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase|β-hydroxybutyryl acyl carrier protein (acp) dehydrase|enoyl acyl carrier protein hydrase|β-hydroxybutyryl acyl carrier  protein dehydrase|crotonyl acyl carrier protein hydratase|β-hydroxybutyryl acyl carrier protein dehydrase|(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)|crotonoyl-[acyl-carrier-protein] hydratase|3-hydroxybutyryl acyl carrier protein dehydratase}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb gene associated=0}}
 +
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 15:57, 12 January 2021

Reaction 4.2.1.58-RXN

  • direction:
    • left-to-right
  • common-name:
    • (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase
  • ec-number:
  • synonymous:
    • β-hydroxybutyryl acyl carrier protein (acp) dehydrase
    • (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase
    • enoyl acyl carrier protein hydrase
    • β-hydroxybutyryl acyl carrier protein dehydrase
    • crotonyl acyl carrier protein hydratase
    • β-hydroxybutyryl acyl carrier protein dehydrase
    • (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)
    • crotonoyl-[acyl-carrier-protein] hydratase
    • 3-hydroxybutyryl acyl carrier protein dehydratase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5971, palmitate biosynthesis II (bacteria and plant cytoplasm):
    • 28 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis (animals and fungi, cytoplasm):
    • 20 reactions found over 31 reactions in the full pathway
  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

  • Property "Synonymous" (as page type) with input value "(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Synonymous" (as page type) with input value "(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Synonymous" (as page type) with input value "crotonoyl-[acyl-carrier-protein] hydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




Retrieved from "http://gem-aureme.genouest.org//esilgem/index.php?title=RXN-14195&oldid=29070"