Difference between revisions of "2.4.1.117-RXN"

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(Created page with "Category:reaction == Reaction RXN-12587 == * direction: ** reversible * common-name: ** aminotransferase class v domain ** cysteine desulfurase * ec-number: ** [http://enz...")
(Created page with "Category:reaction == Reaction APIGNAR-RXN == * direction: ** left-to-right * common-name: ** naringenin chalcone isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.5...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12587 ==
+
== Reaction APIGNAR-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** aminotransferase class v domain
+
** naringenin chalcone isomerase
−
** cysteine desulfurase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
+
** [http://enzyme.expasy.org/EC/5.5.1.6 ec-5.5.1.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''<=>''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c]
+
* 1 [[APIGENIN]][c] '''=>''' 1 [[NARINGENIN-CMPD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-21_005640]]
+
* Gene: [[Ec-00_005930]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[Ec-21_003740]]
+
* Gene: [[Ec-05_001880]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[Ec-22_000950]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7397]], naringenin biosynthesis (engineered):
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6787]], flavonoid biosynthesis (in equisetum):
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R11529 R11529]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02446 R02446]
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43891 43891]
+
** [http://www.uniprot.org/uniprot/P11650 P11650]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P11651 P11651]
−
{{#set: common-name=aminotransferase class v domain|cysteine desulfurase}}
+
** [http://www.uniprot.org/uniprot/P41088 P41088]
−
{{#set: ec-number=ec-2.8.1.7}}
+
** [http://www.uniprot.org/uniprot/P14298 P14298]
−
{{#set: nb gene associated=3}}
+
** [http://www.uniprot.org/uniprot/Q42925 Q42925]
−
{{#set: nb pathway associated=0}}
+
** [http://www.uniprot.org/uniprot/Q42926 Q42926]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/Q08704 Q08704]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P28012 P28012]
 +
** [http://www.uniprot.org/uniprot/P41089 P41089]
 +
** [http://www.uniprot.org/uniprot/O81980 O81980]
 +
** [http://www.uniprot.org/uniprot/O22604 O22604]
 +
** [http://www.uniprot.org/uniprot/O22651 O22651]
 +
** [http://www.uniprot.org/uniprot/Q43754 Q43754]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=naringenin chalcone isomerase}}
 +
{{#set: ec-number=ec-5.5.1.6}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction source=output_pantograph_aragem}}

Revision as of 16:01, 12 January 2021

Reaction APIGNAR-RXN

  • direction:
    • left-to-right
  • common-name:
    • naringenin chalcone isomerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY1F-FLAVSYN, flavonoid biosynthesis:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7397, naringenin biosynthesis (engineered):
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6787, flavonoid biosynthesis (in equisetum):
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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