Difference between revisions of "2.4.1.119-RXN"

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(Created page with "Category:reaction == Reaction ASPARTATEKIN-RXN == * direction: ** reversible * common-name: ** aspartate/glutamate/uridylate kinase ** aspartate kinase/homoserine dehydrog...")
(Created page with "Category:reaction == Reaction GALACTOKIN-RXN == * direction: ** reversible * common-name: ** galactokinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6]...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ASPARTATEKIN-RXN ==
+
== Reaction GALACTOKIN-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** aspartate/glutamate/uridylate kinase
+
** galactokinase
−
** aspartate kinase/homoserine dehydrogenase
 
−
** aspartate kinase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.2.4 ec-2.7.2.4]
+
** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[L-BETA-ASPARTYL-P]][c]
+
* 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GALACTOSE-1P]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-24_000610]]
+
* Gene: [[Ec-04_000280]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[Ec-11_000830]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* Gene: [[Ec-04_004180]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[Ec-27_003730]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[Ec-13_002530]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6559]], spermidine biosynthesis II:
+
* [[PWY-3821]], D-galactose detoxification:
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-2942]], L-lysine biosynthesis III:
+
* [[PWY-6527]], stachyose degradation:
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6562]], norspermidine biosynthesis:
+
* [[PWY-6317]], D-galactose degradation I (Leloir pathway):
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-2941]], L-lysine biosynthesis II:
+
* [[PWY66-422]]:
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''n.a''' reactions in the full pathway
−
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[P101-PWY]], ectoine biosynthesis:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5097]], L-lysine biosynthesis VI:
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7153]], grixazone biosynthesis:
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23779 23779]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13556 13556]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00480 R00480]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01092 R01092]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P08495 P08495]
+
** [http://www.uniprot.org/uniprot/P09608 P09608]
−
** [http://www.uniprot.org/uniprot/P44505 P44505]
+
** [http://www.uniprot.org/uniprot/Q01415 Q01415]
−
** [http://www.uniprot.org/uniprot/P27725 P27725]
+
** [http://www.uniprot.org/uniprot/P22713 P22713]
−
** [http://www.uniprot.org/uniprot/Q04795 Q04795]
+
** [http://www.uniprot.org/uniprot/P31767 P31767]
−
** [http://www.uniprot.org/uniprot/Q57991 Q57991]
+
** [http://www.uniprot.org/uniprot/Q8X7P4 Q8X7P4]
−
** [http://www.uniprot.org/uniprot/P00561 P00561]
+
** [http://www.uniprot.org/uniprot/Q9R7D7 Q9R7D7]
−
** [http://www.uniprot.org/uniprot/P00562 P00562]
+
** [http://www.uniprot.org/uniprot/P96993 P96993]
−
** [http://www.uniprot.org/uniprot/Q9PHT4 Q9PHT4]
+
** [http://www.uniprot.org/uniprot/P04385 P04385]
−
** [http://www.uniprot.org/uniprot/Q9JTN3 Q9JTN3]
+
** [http://www.uniprot.org/uniprot/P0A6T3 P0A6T3]
−
** [http://www.uniprot.org/uniprot/P53553 P53553]
+
** [http://www.uniprot.org/uniprot/P13227 P13227]
−
** [http://www.uniprot.org/uniprot/P10869 P10869]
+
** [http://www.uniprot.org/uniprot/P39574 P39574]
−
** [http://www.uniprot.org/uniprot/P08660 P08660]
+
** [http://www.uniprot.org/uniprot/P13045 P13045]
−
** [http://www.uniprot.org/uniprot/P26512 P26512]
+
** [http://www.uniprot.org/uniprot/Q9SEE5 Q9SEE5]
−
** [http://www.uniprot.org/uniprot/P37142 P37142]
 
−
** [http://www.uniprot.org/uniprot/P41403 P41403]
 
−
** [http://www.uniprot.org/uniprot/P0A4Z9 P0A4Z9]
 
−
** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
 
−
** [http://www.uniprot.org/uniprot/P49079 P49079]
 
−
** [http://www.uniprot.org/uniprot/P49080 P49080]
 
−
** [http://www.uniprot.org/uniprot/P93402 P93402]
 
−
** [http://www.uniprot.org/uniprot/O81852 O81852]
 
−
** [http://www.uniprot.org/uniprot/O63067 O63067]
 
−
** [http://www.uniprot.org/uniprot/O65027 O65027]
 
−
</div>
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=aspartate kinase|aspartate kinase/homoserine dehydrogenase|aspartate/glutamate/uridylate kinase}}
+
{{#set: common-name=galactokinase}}
−
{{#set: ec-number=ec-2.7.2.4}}
+
{{#set: ec-number=ec-2.7.1.6}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
 
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}

Revision as of 16:01, 12 January 2021

Reaction GALACTOKIN-RXN

  • direction:
    • reversible
  • common-name:
    • galactokinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3821, D-galactose detoxification:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6527, stachyose degradation:
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6317, D-galactose degradation I (Leloir pathway):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY66-422:
    • 5 reactions found over n.a reactions in the full pathway

Reconstruction information

External links





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