Difference between revisions of "ExchangeSeed CPD-315"

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(Created page with "Category:reaction == Reaction ASPCARBTRANS-RXN == * direction: ** reversible * common-name: ** aspartate carbamoyltransferase ** aspartate/ornithine carbamoyltransferase *...")
(Created page with "Category:reaction == Reaction RXN-7800 == * direction: ** left-to-right == Reaction formula == * 1 CPD-7100[c] '''+''' 1 PROTON[c] '''=>''' 1 [[2K-4CH3-PENTANOATE]...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ASPCARBTRANS-RXN ==
+
== Reaction RXN-7800 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** aspartate carbamoyltransferase
 
−
** aspartate/ornithine carbamoyltransferase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.1.3.2 ec-2.1.3.2]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CARBAMOYL-P]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CPD-7100]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-00_004630]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[Ec-07_003480]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5686]], UMP biosynthesis I:
+
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered):
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[LEUSYN-PWY]], L-leucine biosynthesis:
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20016 20016]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25079 25079]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01397 R01397]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01652 R01652]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P08955 P08955]
+
{{#set: nb gene associated=0}}
−
** [http://www.uniprot.org/uniprot/P27708 P27708]
+
{{#set: nb pathway associated=2}}
−
** [http://www.uniprot.org/uniprot/Q04595 Q04595]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q59711 Q59711]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q91437 Q91437]
 
−
** [http://www.uniprot.org/uniprot/P65616 P65616]
 
−
** [http://www.uniprot.org/uniprot/Q59712 Q59712]
 
−
** [http://www.uniprot.org/uniprot/Q9CF79 Q9CF79]
 
−
** [http://www.uniprot.org/uniprot/Q58976 Q58976]
 
−
** [http://www.uniprot.org/uniprot/P08421 P08421]
 
−
** [http://www.uniprot.org/uniprot/P0A786 P0A786]
 
−
** [http://www.uniprot.org/uniprot/P0A7F3 P0A7F3]
 
−
** [http://www.uniprot.org/uniprot/P19936 P19936]
 
−
** [http://www.uniprot.org/uniprot/Q58801 Q58801]
 
−
** [http://www.uniprot.org/uniprot/Q9PNJ6 Q9PNJ6]
 
−
** [http://www.uniprot.org/uniprot/P05654 P05654]
 
−
** [http://www.uniprot.org/uniprot/P0A1Z4 P0A1Z4]
 
−
** [http://www.uniprot.org/uniprot/P19910 P19910]
 
−
** [http://www.uniprot.org/uniprot/P07259 P07259]
 
−
** [http://www.uniprot.org/uniprot/P20054 P20054]
 
−
** [http://www.uniprot.org/uniprot/P05990 P05990]
 
−
** [http://www.uniprot.org/uniprot/Q06950 Q06950]
 
−
** [http://www.uniprot.org/uniprot/Q09027 Q09027]
 
−
** [http://www.uniprot.org/uniprot/P49077 P49077]
 
−
** [http://www.uniprot.org/uniprot/Q9S983 Q9S983]
 
−
** [http://www.uniprot.org/uniprot/Q09794 Q09794]
 
−
** [http://www.uniprot.org/uniprot/P74163 P74163]
 
−
** [http://www.uniprot.org/uniprot/Q43064 Q43064]
 
−
** [http://www.uniprot.org/uniprot/Q43086 Q43086]
 
−
** [http://www.uniprot.org/uniprot/Q43087 Q43087]
 
−
** [http://www.uniprot.org/uniprot/Q84493 Q84493]
 
−
** [http://www.uniprot.org/uniprot/Q9UAH8 Q9UAH8]
 
−
** [http://www.uniprot.org/uniprot/Q60252 Q60252]
 
−
** [http://www.uniprot.org/uniprot/P96174 P96174]
 
−
** [http://www.uniprot.org/uniprot/P96175 P96175]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=aspartate/ornithine carbamoyltransferase|aspartate carbamoyltransferase}}
 
−
{{#set: ec-number=ec-2.1.3.2}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 18:43, 12 January 2021

Reaction RXN-7800

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6871, 3-methylbutanol biosynthesis (engineered):
    • 5 reactions found over 7 reactions in the full pathway
  • LEUSYN-PWY, L-leucine biosynthesis:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




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