Difference between revisions of "RXN1G-460"

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(Created page with "Category:reaction == Reaction UROGENDECARBOX-RXN == * direction: ** left-to-right * common-name: ** uroporphyrinogen decarboxylase, chloroplast precursor * ec-number: ** [...")
(Created page with "Category:reaction == Reaction RXN1G-1436 == * direction: ** left-to-right * common-name: ** trehalose 6-phosphate synthase, family gt20 / trehalose 6-phosphate phosphatase...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction UROGENDECARBOX-RXN ==
+
== Reaction RXN1G-1436 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** uroporphyrinogen decarboxylase, chloroplast precursor
+
** trehalose 6-phosphate synthase, family gt20 / trehalose 6-phosphate phosphatase
 +
** had-like domain
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.37 ec-4.1.1.37]
+
** [http://enzyme.expasy.org/EC/3.1.3.12 ec-3.1.3.12]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 4 [[PROTON]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c] '''=>''' 4 [[CARBON-DIOXIDE]][c] '''+''' 1 [[COPROPORPHYRINOGEN_III]][c]
+
* 1 [[CPD1G-771]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD1G-1345]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-24_000620]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[Ec-11_002540]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-22_003320]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-05_002680]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-20_003980]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-01_000360]]
+
* Gene: [[Ec-06_003140]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-19_005250]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[Ec-24_000650]]
+
* Gene: [[Ec-24_004390]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-08_005270]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HEME-BIOSYNTHESIS-II]], heme b biosynthesis I (aerobic):
+
* [[PWYG-321]], mycolate biosynthesis:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''30''' reactions found over '''182''' reactions in the full pathway
−
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent):
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent):
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY0-1415]], superpathway of heme b biosynthesis from uroporphyrinogen-III:
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[HEMESYN2-PWY]], heme b biosynthesis II (oxygen-independent):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7766]], heme b biosynthesis IV (Gram-positive bacteria):
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic):
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19866 19866]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03197 R03197]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P06132 P06132]
 
−
** [http://www.uniprot.org/uniprot/P16891 P16891]
 
−
** [http://www.uniprot.org/uniprot/P32395 P32395]
 
−
** [http://www.uniprot.org/uniprot/Q9PN54 Q9PN54]
 
−
** [http://www.uniprot.org/uniprot/Q9JV52 Q9JV52]
 
−
** [http://www.uniprot.org/uniprot/P29680 P29680]
 
−
** [http://www.uniprot.org/uniprot/P32347 P32347]
 
−
** [http://www.uniprot.org/uniprot/P32920 P32920]
 
−
** [http://www.uniprot.org/uniprot/P54224 P54224]
 
−
** [http://www.uniprot.org/uniprot/O81220 O81220]
 
−
** [http://www.uniprot.org/uniprot/P70697 P70697]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=uroporphyrinogen decarboxylase, chloroplast precursor}}
+
{{#set: common-name=had-like domain|trehalose 6-phosphate synthase, family gt20 / trehalose 6-phosphate phosphatase}}
−
{{#set: ec-number=ec-4.1.1.37}}
+
{{#set: ec-number=ec-3.1.3.12}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=8}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 15:36, 13 January 2021

Reaction RXN1G-1436

  • direction:
    • left-to-right
  • common-name:
    • trehalose 6-phosphate synthase, family gt20 / trehalose 6-phosphate phosphatase
    • had-like domain
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYG-321, mycolate biosynthesis:
    • 30 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//esilgem/index.php?title=RXN1G-460&oldid=43903"