Difference between revisions of "GMP-REDUCT-RXN"

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(Created page with "Category:reaction == Reaction DTDPKIN-RXN == * direction: ** left-to-right * common-name: ** nucleoside diphosphate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7...")
(Created page with "Category:reaction == Reaction RXN-14569 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.87 ec-2.7.7.87] == Reaction formula == * 1 ATP...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DTDPKIN-RXN ==
+
== Reaction RXN-14569 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** nucleoside diphosphate kinase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6]
+
** [http://enzyme.expasy.org/EC/2.7.7.87 ec-2.7.7.87]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[TDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[TTP]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[THR]][c] '''<=>''' 1 [[CPD-15435]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* Gene: [[Ec-26_003930]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-07_000140]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-03_001380]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-22_003280]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-04_001140]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[Ec-11_004330]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[Ec-11_005170]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP:
+
* [[PWY0-1587]], N6-L-threonylcarbamoyladenosine37-modified tRNA biosynthesis:
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II:
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I:
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli):
 
−
** '''14''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV:
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III:
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10463 R10463]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27683 27683]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36410 36410]
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02093 R02093]
+
{{#set: ec-number=ec-2.7.7.87}}
−
{{#set: direction=left-to-right}}
+
{{#set: nb gene associated=0}}
−
{{#set: common-name=nucleoside diphosphate kinase}}
+
{{#set: nb pathway associated=1}}
−
{{#set: ec-number=ec-2.7.4.6}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: nb gene associated=7}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: nb pathway associated=7}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 15:42, 13 January 2021

Reaction RXN-14569

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1587, N6-L-threonylcarbamoyladenosine37-modified tRNA biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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